Gene Tcr_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1906 
Symbol 
ID3761100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp2087066 
End bp2087527 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content47% 
IMG OID637786649 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 
Protein accessionYP_392170 
Protein GI78486245 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0865411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGC AGGTGCAATA TAAGATTTTA GACCCTCGTT TGGGAAAAGA AATTGAGATG 
CCTCACTATG GCACGAAGGG ATCAGCTGGG TTAGATTTAA GAGCCTGTAT TGAAAACGAC 
ATGATTATTG AACCTGGACA AACCGTTCTA ATCCCAACGG GAATGGCGAT TCATCTAGAC 
GACCCAGGGT TAGCGGCCAT GTTGCTGCCA AGATCAGGCT TAGGTCATAA GCATGGTATT 
GTGTTGGGTA ATTTGGTGGG GTTGATCGAT TCGGACTACC AAGGACCCTT GATGGTTTCT 
TGCTGGAACA GAAGTGAAGA GGCTTATAAC GTAACCGTGG GTGAACGAAT CGCTCAAATG 
GTGATTGTGC CGGTCCTTCA ACCGGTTTTT ACTCAGGTAG AAGAGTTTGG CGATGCCACA 
GAGCGTGGTG AGGGTGGGTT CGGTCATACG GGATCGCATT AA
 
Protein sequence
MTMQVQYKIL DPRLGKEIEM PHYGTKGSAG LDLRACIEND MIIEPGQTVL IPTGMAIHLD 
DPGLAAMLLP RSGLGHKHGI VLGNLVGLID SDYQGPLMVS CWNRSEEAYN VTVGERIAQM 
VIVPVLQPVF TQVEEFGDAT ERGEGGFGHT GSH