Gene Tcr_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1904 
Symbol 
ID3761098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2084673 
End bp2085491 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content42% 
IMG OID637786647 
Productputative signal transduction protein 
Protein accessionYP_392168 
Protein GI78486243 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAC GATTAAGAGC TGCCTTAAAA GCGATACAAG GAGTAAAAAT TCCGGATTTA 
CCAAAAGAAA TCATGGAGTT AGATGCTGCT CTTGGTAGTA AGTTCCCTAA TAATCAAGCC
ATCACGGACA TTATTGAAAG TAACACGAAG CTGTCGGGTG AGGTGTTAAG AATTGTGAAT
TCACCGGTGA TGAAGTTGAA AACCCCTGTT AAGTCGATTC GAGAGTCGGT GGATGTGCTT
GGGTATGTTA ACTTAAGAAA TCTGGTGATT TCCGCAGCGA TTAAAAACCT GTTTAACACA
CATGAAGTAG AAGGCATTAT CGAGCATTCT AAAGACGTGG CGTTTTGTTG TGCAGAGCTT
TCTGAATATA TTGCTGATAT TTCGCGTGAT GAGGCTTACT TATTGGGGTT GTTCCATAAT
GGTGGTTGTT TGCTATTGGC CACTAAGGAT TCAGACAAGT ATGAGAAAAT GTTTTCACGC
CTTAATACGC ATCCCGTATC CGGGGTTGAA AAAGAAATTG AAATCTATGG TGCCAGTCAT
ACTGACATCG GTATTTTACT GGGACAGAAA TGGAAACTGT CGGTTGAAAT GTTGAACGCG
ATTATGCTGC ACCATATTCC TGAAAACAAT GTGGCCAAAG ATAAAGTTCG CGGCATGATT
GCCATGCTGA AAGTTGCGAA CGTAGTGGTC AATGAAGTTT CTTATGGTGC TTATATGACA
GAAGAAGCAC GCGAATTTAT GGCGGAAGGG CAAGACGAAT TAATGCTTGA GCCGTCTGTG
GTGAATCAGT TACGCCGTGT CCTAATCAGT TCCTCATAA
 
Protein sequence
MQERLRAALK AIQGVKIPDL PKEIMELDAA LGSKFPNNQA ITDIIESNTK LSGEVLRIVN 
SPVMKLKTPV KSIRESVDVL GYVNLRNLVI SAAIKNLFNT HEVEGIIEHS KDVAFCCAEL
SEYIADISRD EAYLLGLFHN GGCLLLATKD SDKYEKMFSR LNTHPVSGVE KEIEIYGASH
TDIGILLGQK WKLSVEMLNA IMLHHIPENN VAKDKVRGMI AMLKVANVVV NEVSYGAYMT
EEAREFMAEG QDELMLEPSV VNQLRRVLIS SS