Gene Tcr_1895 details

Gene Information

• Locus tag: Tcr_1895
• Symbol: pyrE
• ID: 3762431
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 2073908
• End bp: 2074552
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637786638
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_392159
• Protein GI: 78486234
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAT CTGAATTTAT TGAATTCATT ATGCAAGCTG GCGTACTTAA GCTGGGTGAA 
TTCACACTTA AATCCGGGCG CAAAAGCCCT TACTTCTTCA ACGCCGGTCT ATTCAATACT 
GGCGGACAAA TGGCTCAACT GGCCAAAGCA TATGCCGCCA CCATTGCAGA AAGCAAACTG 
GCGTATGACG TCCTATTTGG ACCCGCCTAT AAAGGCATTC CCCTTGCGGC GACCACCAGT 
GTTTCTTTAG CACAGGACTT TCAGCAAGAC ACACCGTATG CCTTCAACCG TAAAGAAGCC 
AAAGACCACG GTGAAGGTGG CAATATTGTT GGTCACCCAT TGGAAGGGAA CATTTTAATT 
ATTGACGATG TCATTACCGC GGGAACAGCG ATTCGGGAAT CAATGGACAT TATCCAAGCG 
AATGGTGCCC GTCCAGCCGG CGTAGTGGTT GCTCTAGATC GTATGGAAAA AGGGCAAGGT 
GAAAAGTCCG CCATACAAGA AGTCGAACAG GAGTACGGCA TTCCCGTCAT CAGCATCATT 
AACCTAAATG ACATTATTGA GTATCTGGAA ACACATAACC AAGCGAATCA AGAAATCCTA 
GATTCGATGA AAACTTATCG AGCACAATAT GGCATTGCTC ATTAG 

 

Protein sequence

MNKSEFIEFI MQAGVLKLGE FTLKSGRKSP YFFNAGLFNT GGQMAQLAKA YAATIAESKL 
AYDVLFGPAY KGIPLAATTS VSLAQDFQQD TPYAFNRKEA KDHGEGGNIV GHPLEGNILI 
IDDVITAGTA IRESMDIIQA NGARPAGVVV ALDRMEKGQG EKSAIQEVEQ EYGIPVISII 
NLNDIIEYLE THNQANQEIL DSMKTYRAQY GIAH