Gene Tcr_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1890 
Symbol 
ID3762426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2067725 
End bp2068000 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content48% 
IMG OID637786633 
Producthypothetical protein 
Protein accessionYP_392154 
Protein GI78486229 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTT TTAAATGGCT AATTATCTTG CCTGTCCGTT TCTATCAGCT TTTTATTAGC 
CCGATACTAG GCCCTCGCTG CCGTTTTTAC CCAACTTGCT CACACTATAC GATTGAAGCG
GTACAACAAC ACGGCGTGTT TTGCGGTTTA TGGCTGGCAA TCAAACGAAT TGCCAAATGC
CACCCAGGAA ACCCGGGGGG CGTTGACCCG GTTCCAAGCT GTGGCTGTCA CTCCGACAAA
GAAACCACCC CGAAAGAAAA ATCGGATAAT GCTTGA
 
Protein sequence
MNPFKWLIIL PVRFYQLFIS PILGPRCRFY PTCSHYTIEA VQQHGVFCGL WLAIKRIAKC 
HPGNPGGVDP VPSCGCHSDK ETTPKEKSDN A