Gene Tcr_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1881 
Symbol 
ID3762417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2057546 
End bp2058649 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content45% 
IMG OID637786624 
Producthypothetical protein 
Protein accessionYP_392145 
Protein GI78486220 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000322257 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCAA ACGCTCCTTA TGAAGAAGGT TTTTTAATTA TTTTGCTCTT GACCGCTGTT 
GTCGGGTTGC TGTGGTTGTT TTCCCCTTTT TTAGAGGCGT TGCTGTTTGC GATGATTCTC
GCTACCGCAA CGTACTCCTT GTATTTAAAA GTATTACCCA AAGTAAAGCA ATCGCCAAAT
TACGCCTCGG CTGTCATGAG TGTCTTTGTG TTTGTAACCG TCATTGCCCC CGTGACGTAT
TTATTGCTTG AAGTGGGGTT GCAAGTCGGG CATATCGTCA GCCAAGCAGA ACAATGGTTG
TCTCAACAGA CGCCAGAATC CTTATCTCAG TTGAATCAAA ATCTGGTTGA AGTCATTCCT
TTCCCAGAAA GTACTCAAAT GGAGCTGATC CGTCAGGTCA AAGACAATTC CGACAAGCTG
ATAACCTTTG CGCAAGATAC GATCATGTTT TTGGTCAAAG GGATTTTTGG GAATACAACG
TCATTCATCA CTTTTATCTT TTTAGCGGTG TTTGCGTTGT TTTTCTTTTA CCGCGATGGG
CACCGTATTT CGCATCACTT AAAAATCTTG TCACCGTTAG AAAATTATTA TGACACGATG
ATTATGACGC GCTTTTCAAA TCTGTCGACC ATTTTACTGT TGTCGGTGCT GGGGGTGGCC
CTTATGCAAG GGGCTGTCTT CGCCATAGTC GCTTGGTTTT TAGGCATGCC CGGATTGTTT
ATCGGGATGG CGATTGCCAT TACGTCCTTC ATTCCGATTG TCGGCGCGGC GTTAATCTGG
ATTCCTTTTG CTTTAATTAT GGTGGCGCAA GGCGATTATG TGGCCGCCGG GGTGGTGGTG
TTTTTCGGTG CGGTTGTGAA CGGGTTCTTT ATTGATAACG TTGTCCGTCC GATGTTGATT
CAAAAAATCT CGTTGTCTTT AGGCGGGGCT TCTGAAGAAT TGGCTGTGGC GAACCATACT
TTGATTACCG TGTTATCCAC CTTTGCCGGA CTGATTCATT TTGGGATGAT CGGGTTATTC
TTTGGGCCGG TCATTGCTGC GATGGCGATT ACCATCTTTG ATGTTTATGC TCATAAAAAC
TCGGATTTAC TAGACCGAAC GTAA
 
Protein sequence
MRSNAPYEEG FLIILLLTAV VGLLWLFSPF LEALLFAMIL ATATYSLYLK VLPKVKQSPN 
YASAVMSVFV FVTVIAPVTY LLLEVGLQVG HIVSQAEQWL SQQTPESLSQ LNQNLVEVIP
FPESTQMELI RQVKDNSDKL ITFAQDTIMF LVKGIFGNTT SFITFIFLAV FALFFFYRDG
HRISHHLKIL SPLENYYDTM IMTRFSNLST ILLLSVLGVA LMQGAVFAIV AWFLGMPGLF
IGMAIAITSF IPIVGAALIW IPFALIMVAQ GDYVAAGVVV FFGAVVNGFF IDNVVRPMLI
QKISLSLGGA SEELAVANHT LITVLSTFAG LIHFGMIGLF FGPVIAAMAI TIFDVYAHKN
SDLLDRT