Gene Tcr_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1871 
Symbol 
ID3761084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2046730 
End bp2047659 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content49% 
IMG OID637786614 
ProductBeta-lactamase-like 
Protein accessionYP_392135 
Protein GI78486210 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC GTACATGGTG GGTTGGACTG TTACTGACAT TGGGAATCAT GTCATCGGCG 
TGGTCGGCCG AGGTTGAATT TCGTCAGGTG ACGCCGGGTG TTTATGCTTA TGTCGGGCCT
TTGACGGATC GTACTCCTGA AAACTTGGGG CTGAATAATA ATATCGGTTT GATCGATACC
GCTGAAGGCT GGGTTTTGGT GGATTCCAGT GCCGGTGATC TGGCGGCAAA AGCATTGGAA
AAAGCCGCTC AGAACATTAA ACCGCAACCT GTTGTGGCGG TTGTGAATTT AGGCAGTCAG
GACCATCGCT GGTTAGGGAA CGATTATTTT GCTCGTCAAG GCGCTAAAAT TTATGCGTAC
CAAGGCACAG TGGCAACCCA GAAAAAGATG TTTACTCAAT TGCAGGCATC GGTTGCCAGA
AAGGTACCTG CATTGAAAGG CATGAAAATG AAAACAGCGG ATGTGGTGTT GCAAAAGAAG
CAAAACTCAT TTTCATTGGG AGGCGTTTCA ATGCAGTTAA ATTTTTACGG GGATGCACAT
TTCCCGGGCG ATGCAGTGCT GTGGTTGCCT AAACAAAAGA TTTTGTTTAC CGGCGATGTG
GTGTATGTCG ATCGTATGTT GGGTGTTCAT CCGTGGTCGA AGGTGGTGTC ATGGAATGCA
GCGTATAAAG CCATGCGGGC GTTGCCAGCA ACGGTTATTG TCCCTGGGCA CGGTCGCGTC
ACGACTTGGT CACAAGCCGA TGCGGAGACG GGAAACTACT TGGCCAAGCT GGTGCAAACC
ATGACGGAAG AAGCGGAAAA CTTTTCCGGT GTGGGCGCGG CGGTGTCTGC CAATCAGGAT
TGGCCAGCGT TTAAGCATTT GAAGCATTAC GATGCTTGGC ATAAACGCAA TTTGAACCGA
ACGTATCTGC AAATAGAAGC GTCGCTTTAA
 
Protein sequence
MNKRTWWVGL LLTLGIMSSA WSAEVEFRQV TPGVYAYVGP LTDRTPENLG LNNNIGLIDT 
AEGWVLVDSS AGDLAAKALE KAAQNIKPQP VVAVVNLGSQ DHRWLGNDYF ARQGAKIYAY
QGTVATQKKM FTQLQASVAR KVPALKGMKM KTADVVLQKK QNSFSLGGVS MQLNFYGDAH
FPGDAVLWLP KQKILFTGDV VYVDRMLGVH PWSKVVSWNA AYKAMRALPA TVIVPGHGRV
TTWSQADAET GNYLAKLVQT MTEEAENFSG VGAAVSANQD WPAFKHLKHY DAWHKRNLNR
TYLQIEASL