| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1856 |
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| Symbol | |
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| ID | 3761069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2031032 |
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| End bp | 2034226 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637786600 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_392122 |
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| Protein GI | 78486197 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACTC GAATGACTGA TTGGGCAGTC ACGAACCGTT TGTTGGTTGT GATTGCTTTG
ATAACAATAA TTTCCACCTC TATTTTTATG ATTCCGAAAT TAAATTTGGA TGCTTTTCCC
GATGTCACCA ATGTACAAGT TACAGTTAAC ACAGAAGCAC CGGGTTTAGC CTCCGAAGAG
GTTGAGCAGC TTATTACCTA TCCGATCGAA GCGGTTATGT ATGCGTTACC AGATGTTGAG
GAGGTACGTT CAATTTCGAA AACGGGTCTC TCAGGTGTCA CGATTGTCTT TAAAGAAGGG
ACGGATATCT ATTTTGCACG ACAGTTGGTG TTTGAACGCC TGCAATCGGC AAAAGAGTTA
ATCCCCGATA ACGTTGGTAC ACCTGAAATA GGTCCCAACA CTTCAGGGTT AGGACAAGTA
TATCAATACC TTCTCGTTGC TGAGCCGGGT TCTGGTTATG ATGCTATTGC TCTTCGCAGT
TTGAATGATT GGGTTGTTAA ACTGTTATTG ATGCCTGTAG ATGGTATTAC TGATGTTCTC
TCATTTGGTG GTGAAGTTCG CCAATACCAA GTGAATATTA ACCCATCTCG CTTGCTAGCT
TTTAAGCTGA CACAAGATGA TGTTATTCAT GCTATTGAAC AAAATAATGA CAATGTTGGT
GGTTGGTACA TGAACCGTGG TCAAGAACAA CTCATTATTC GTGGTTCAGG TTGGTTTAAC
GCTGGCAAAG ATGGCCTTGA AGAAATTCGC CAAGTACCAT TAAAAACAAT TGATGGAAAA
GTCATTAAAG TTGCTGATGT TGCAATGGTC GAATTTGGTG GGGAGATTCG TCAAGGGGCA
ACAACTATGA CCCGAAGAAC AAATGATGGG CAAGTGGAAA CACTTGGTGA AATTGTTTCA
GGTATCGTGC TAAAACGCAT GGGGGCCAAT ACGCAAGCAA CAATAGAAGG AATTGACGAG
CGAATTGATA TGATTCAACT GGCCTTGCCA GAAGGAGTTA AGTTTGAAGC GTTCTATGAT
CAAACTGATT TAATTGATAA GGCAATCAAT ACCGTTGCAA ATGCTTTAGT AGAGGCATTT
ATTTTTATTG TTATTGTTCT GGTCTTGTTT TTATTGAATG TTCGAGCTGT AACATTAGTA
CTGATATCGA TTCCATTATC TATTGGGGTC GCACTGGCAA TAATGGCGCA TTATGGTTTG
TCGGCCAATT TAATGTCATT GGGTGGTCTT GCCGTAGCTA TCGGGATGAT GGTAGACGGT
GCTGTGGTTA TGATGGAAAA TATCTTTAAG CACTTAACAA AACCCGACTC GAGGCATAAT
TCTGAACACA GTAAAAATCT TAGCCCAGGT TCTGAAACAC CATATGAATT AGAGCGGGAT
CATGGTATTG CTTTGCGGAT TAAATTGGCG GCAAGTGAGG TTGCCAAGCC TATATTTTTT
GCCGTATCCA TTATTATGGT AGTTTTTACG CCTCTGTTTT CCTTAGAAGG TGTTGAGGCG
AAGTTGTTTC AGCCTATGGC AGTGAGCATT ATGATTGCAA TGGCAGTATC TTTAGTTGTT
TCTTTAATTG TTGTGCCTGC GCTAGCGAGT TACTTTTTTC AAAATGGTTT TAAGGAAAGA
ACAAGCCCTT TGATGGTTAT TCTGGAAAAG GCGTACCGAA TAGTGCTTGC CAAGGCGATG
AATGTTAAAG CGGTTGTCTT ATCAGGTGCC ATTGTGCTAC TCATTTCTGC TCTTATGTTA
GTGCCGTACT TAGGAACAGA GTTTGCGCCT GAATTAGAAG AGGGTACGAT AAATTTACGA
GTTACCATGG CGCCCTCAAC AAGCTTAGAT ACAGCTTTGT CGGTATCTCC TAAACTTGAA
TCTATACTAA TGGAGTTTCC AGAGGTCACT TATGCGGTTA GCCGTATTGG ACGAGCAGAA
GTTGGTGGAG ATCCAGAGCC TGTAAGTAAT ATTGAAATCT TTATTGGTTT AAAGCCTGTA
TCTGAATGGT CAACAGCAGA CAACCGTCTT GAACTGCAAG AAAAAATGGA AGAGAAGCTT
CAACAACATC CAGGGCTTTT ATTCAACTTT TCACAACCTA TTGCAACCCG TATAGATGAG
TTGTTATCCG GTGTAAAAGC ACAATTAGCT ATAAAGCTAA TCGGACCAGA CTTGAATGTT
CTGTCTGATA AAGGAAAGTT AATTGAAAAA GCCGTCAGAA ATATTGAGGG TGCAAGAGAT
GTTGCAATGG AAGCTATTGA AGGAGAAGCG CAATTAGTAA TTAAGCCAAA CCGCCGAGAA
CTTTCACGCT ACGGCCTTTC TGTAGGCGAT GTAATGTCCA AAGTGAAAGA TGGGCTCGGA
GGTCGTGAAG CTGGGCAAGT CATTAATGGT AACGAACGTT ATGATATTTA TGTGAGGATA
GCAGATGAAT TTAGAAATAA CGTTAATGCG ATTTCTGACC TAAGATTGCA GTCTCCATCA
GGAGCGGTTG TTAGAATCGG TGATATTGCA ACAGTCTCCA TTGAGTCTGG TCCTCCACAA
GTAAGGCGTG ATGATGTGCA GCGTCGCGTC GTTATACAAG CTAACGTTCA AGGACGTGAT
ATGGGAGGAG TTGTTAAAGA CATCAGAGAT ACTGTTGCTA AAGAAATAGA TTTACCACCT
GGTTATACCG TAGCTATTGG TGGGCAATTT GAAAACCAGC AACGTGCACA AAATCGATTA
ATGGTGGTGG TGCCAATTTC AATTGGTTTG ATTGCATTAT TGCTGTACTT TGCATTTAAT
TCTGTTGGTC AAGCAATGCT AATTCTAGTT AATTTACCAT TGGCCATGAT TGGTGGAATT
GCTGCGCTTT ATATATCAGG GCAGTATTTG TCCGTTCCTA GCTCAATTGG ATTTATTACA
TTATTCGGTG TTGCGGTGTT AAATGGCGTA GTTATGGTTG AAGCAATCAA TCACCGGATC
ATGGGTGGAA ATGAATCAAT TTCGCAAGCC ATTTTTGAGG GTGCTATTTC AAGGTTAAGA
CCTGTGTTAA TGACTGCAAT TATTGCGTCA CTAGGACTAA TTCCAATGAT TATGGCAACA
GGGATTGGGT CTGAGATTCA ACGCCCGTTA GCTACAGTGA TTGTAGGGGG ATTAATCTCG
TCAACTTTCC TCACTCTTTT TGTTTTGCCA GTACTGTATG AATGGTTCTC AAAAAAGAAA
TTAGCTGAAT CATAA
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| Protein sequence | MITRMTDWAV TNRLLVVIAL ITIISTSIFM IPKLNLDAFP DVTNVQVTVN TEAPGLASEE
VEQLITYPIE AVMYALPDVE EVRSISKTGL SGVTIVFKEG TDIYFARQLV FERLQSAKEL
IPDNVGTPEI GPNTSGLGQV YQYLLVAEPG SGYDAIALRS LNDWVVKLLL MPVDGITDVL
SFGGEVRQYQ VNINPSRLLA FKLTQDDVIH AIEQNNDNVG GWYMNRGQEQ LIIRGSGWFN
AGKDGLEEIR QVPLKTIDGK VIKVADVAMV EFGGEIRQGA TTMTRRTNDG QVETLGEIVS
GIVLKRMGAN TQATIEGIDE RIDMIQLALP EGVKFEAFYD QTDLIDKAIN TVANALVEAF
IFIVIVLVLF LLNVRAVTLV LISIPLSIGV ALAIMAHYGL SANLMSLGGL AVAIGMMVDG
AVVMMENIFK HLTKPDSRHN SEHSKNLSPG SETPYELERD HGIALRIKLA ASEVAKPIFF
AVSIIMVVFT PLFSLEGVEA KLFQPMAVSI MIAMAVSLVV SLIVVPALAS YFFQNGFKER
TSPLMVILEK AYRIVLAKAM NVKAVVLSGA IVLLISALML VPYLGTEFAP ELEEGTINLR
VTMAPSTSLD TALSVSPKLE SILMEFPEVT YAVSRIGRAE VGGDPEPVSN IEIFIGLKPV
SEWSTADNRL ELQEKMEEKL QQHPGLLFNF SQPIATRIDE LLSGVKAQLA IKLIGPDLNV
LSDKGKLIEK AVRNIEGARD VAMEAIEGEA QLVIKPNRRE LSRYGLSVGD VMSKVKDGLG
GREAGQVING NERYDIYVRI ADEFRNNVNA ISDLRLQSPS GAVVRIGDIA TVSIESGPPQ
VRRDDVQRRV VIQANVQGRD MGGVVKDIRD TVAKEIDLPP GYTVAIGGQF ENQQRAQNRL
MVVVPISIGL IALLLYFAFN SVGQAMLILV NLPLAMIGGI AALYISGQYL SVPSSIGFIT
LFGVAVLNGV VMVEAINHRI MGGNESISQA IFEGAISRLR PVLMTAIIAS LGLIPMIMAT
GIGSEIQRPL ATVIVGGLIS STFLTLFVLP VLYEWFSKKK LAES
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