Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1838 |
Symbol | |
ID | 3761051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2013296 |
End bp | 2013865 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786582 |
Product | hypothetical protein |
Protein accession | YP_392104 |
Protein GI | 78486179 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000231673 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACCAG TCGGTCAAGG CGGTTTGTTT TTAATTCAAT TTTTAGCAGG CCTAGTTATT TTTACCCTAC TGTTACGTTT CTTCATGCGT GCGACCTATG TTGATTGGCG CCACCCCATT GTGAACTTTA TTGCCAAAGT CACCAATCCA CTTTGTGCAC CACTCAACAT GGTCCTACCA AAGCCAAATC GCTGGGATTG GAGTGCGATT TTGACCGCCA TGCTGGTGCA GGCCCTCTTA GTGATCTTAA TCGGATTTTT AACAGACCGA AGTTTTGGCG TCGGATTAAT TGTTATTTCC TCGGTCACCG AGATTATGAA CCAACTCTTA GACATGATGT TCTGGCTGAT CATCATTCAA GTGATTTTAA GCTGGGTGTC ACAAGGCTAT AACCCGAACA CGGCTATTTT CGACCAAATG GCACAACCGA TTTTAAGTCC TTTTCAAAGA CTGATTCCAC CGATGGGCGG ACTCGATTTA TCCCCTATTG TGGCCATCAT TGCCATCAAA TTGACACAGA TTGTCATTGT GGGATCCATT GCTCAACTGG GTCAAAATAT GTTGCTTTAG
|
Protein sequence | MTPVGQGGLF LIQFLAGLVI FTLLLRFFMR ATYVDWRHPI VNFIAKVTNP LCAPLNMVLP KPNRWDWSAI LTAMLVQALL VILIGFLTDR SFGVGLIVIS SVTEIMNQLL DMMFWLIIIQ VILSWVSQGY NPNTAIFDQM AQPILSPFQR LIPPMGGLDL SPIVAIIAIK LTQIVIVGSI AQLGQNMLL
|
| |