Gene Tcr_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1836 
Symbol 
ID3761049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2011034 
End bp2012308 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content47% 
IMG OID637786580 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_392102 
Protein GI78486177 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000665006 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAA TTGCAAAGCA GCGATTGAGT GACGTTTTTA AACATATTGA CGTTGAAGAA 
GAAGTTATTA CTCGACTCTC CGTACCGAAA AGATCGATTA AAGCGAGTAT TCCGGTACGA
ATGGATGACG GCAGCCTTCG CATTTTTACA GGTTACCGCG TGCAATATGA TGACACACGC
GGTCCCACCA AAGGAGGCAT ACGCTACCAT CCTCGTGTCA ACGAAGATGA GGTGACATCT
TTAAGTTTCT GGATGACCGT GAAATGCGCC GTGGCCGGTT TGCCTTTTGG TGGAGCGAAA
GGCGGCATCA CGGTCAACCC AAAAGAACTC TCTCAGTTGG AAATTGAGCG CCTCTCTCGT
GGTTACATTC GGGCCTTTGC AGATGTGATA GGGGAAACTC GAGACATCCC GGCACCGGAC
ATGTACACCA ATGCCACAAT CATGGGCTGG ATGGCCGATG AATACTCCAT CATATCTCGC
CAGCAAGTTC CTGGCATTAT TACAGGAAAA CCCGTTCACT TGAACGGCTC TGAAGGCCGC
ACACAAGCCA CCGGGCAAGG CGCATTATTC TGTTTGAATG AATACGCACG TCGTCAAGGC
TGGGACATTA AGAACACCAC CGTCGCGGTA CAAGGATTTG GGAATGCGGG GTACCATTTT
GCACGCCTCG CGCAACAAGA AGGGTATCGA GTGATTGCGG TTTCCGATTC CAGCGGAGGC
ATATTGACTC CAAGTGGCCT GAATATCGAC GATGTCAAAC AGTACAAAGA TCAAACCTCT
GAACTGCAAG CCGTCTATTG TGATGGCTCT GTCTGCAAAG TGATCGAGCA TGAGAAATTA
ACCAATGAAG AGTTACTGGA ACTGGAAATT GATGTTCTGG TATTGGCAGC GATGGAAAAC
CAGGTCACAC AAGAAAACGT AGACAACATT CAAGCCCACA CCATTCTTGA AATTGCCAAT
GGACCGGTAT CCCCACAAGC GGATGAAGTG CTTTATGCTA AAAACATTCA GATCATTCCC
GATGTTCTGG CAAATGCGGG CGGGGTCACC GTCAGTTATT TTGAATGGGT TCAGAACCGC
GCTGGCTTTT ACTGGGAAGC CGATGAAATC CGAGTAAAAC TGTCTAAAAT TATGAAACGA
GAGTCCAATA CCATCTATGA CTTAGCCATT CGTTATGAAA CCTCTTTGAG AACGGCAGCT
TATATTCATG GCATTGAACG ATTAGCTGGG GCGATTAACC AACGAGGAAA CCGTAAATTC
TTTAAAAAAA ATTAA
 
Protein sequence
MFEIAKQRLS DVFKHIDVEE EVITRLSVPK RSIKASIPVR MDDGSLRIFT GYRVQYDDTR 
GPTKGGIRYH PRVNEDEVTS LSFWMTVKCA VAGLPFGGAK GGITVNPKEL SQLEIERLSR
GYIRAFADVI GETRDIPAPD MYTNATIMGW MADEYSIISR QQVPGIITGK PVHLNGSEGR
TQATGQGALF CLNEYARRQG WDIKNTTVAV QGFGNAGYHF ARLAQQEGYR VIAVSDSSGG
ILTPSGLNID DVKQYKDQTS ELQAVYCDGS VCKVIEHEKL TNEELLELEI DVLVLAAMEN
QVTQENVDNI QAHTILEIAN GPVSPQADEV LYAKNIQIIP DVLANAGGVT VSYFEWVQNR
AGFYWEADEI RVKLSKIMKR ESNTIYDLAI RYETSLRTAA YIHGIERLAG AINQRGNRKF
FKKN