Gene Tcr_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1833 
Symbol 
ID3761046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2007909 
End bp2008700 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content44% 
IMG OID637786577 
Producthypothetical protein 
Protein accessionYP_392099 
Protein GI78486174 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.795184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTCAATCCAG TGACGTGAGT TATCCCTACA CCGAGAAAAT GTCTCGATCG 
GAGTATGAAG AAACCAAAAA GTTATTGCAA ATAGAACTCT TGAAACTGCA AAAGTGGATC
AAGCACAACG GCGAGCGTTT AGTGATTTTG TTTGAAGGTC GGGACGCGGC AGGAAAAGGG
GGAACCATTA AACGCATCAT GGAGCATTTA AACCCTCGTG GCGCCAGAGT GGTGGCTTTG
GATAAGCCAA GTGAAACCGA AAAAGGTCAA TGGTATTTTC AACGTTATGT GCAACATTTA
CCAACGGCAG GGGAGATGGT GCTCTTTGAC CGTTCTTGGT ATAACCGTGC AGGTGTGGAA
CGCGTGATGG GGTTTTGTAC CCCGCCACAA TATAACCAGT TTGTGCATCA AGCCCCTGAG
TTTGAACGCA TGATTTCCGC CAGTGGAGTT CACTTGATGA AGTTTTGGTT TTCCGTGGGG
CGAGAAGAGC AATTACGCCG CTTTAACGCT CGCAAAAGCG ATCCATTGAA ACAATGGAAG
CTGAGCCCGA TGGATTTAGC ATCTCTCGAC CGATGGAACG ATTACACCAA GGCAAAAGAA
GATATGTTTT TTTACACCAA TACCACCGAA GCACCTTGGA CGGTCATCAA GTCAAATGAC
AAAAAGCGCG CTCGATTGGA AGCCATGCGT TTTATTTTGA ATTATTTTGA TTACGAAGAC
AAAAACGAAG GCGTGTTGCA ACAGGATCCA TTAATCATCA GCAGTGGTGA AGATGTGTTT
AAAGAAGATT AA
 
Protein sequence
MKKIQSSDVS YPYTEKMSRS EYEETKKLLQ IELLKLQKWI KHNGERLVIL FEGRDAAGKG 
GTIKRIMEHL NPRGARVVAL DKPSETEKGQ WYFQRYVQHL PTAGEMVLFD RSWYNRAGVE
RVMGFCTPPQ YNQFVHQAPE FERMISASGV HLMKFWFSVG REEQLRRFNA RKSDPLKQWK
LSPMDLASLD RWNDYTKAKE DMFFYTNTTE APWTVIKSND KKRARLEAMR FILNYFDYED
KNEGVLQQDP LIISSGEDVF KED