Gene Tcr_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1821 
Symbol 
ID3761393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1997343 
End bp1998500 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content49% 
IMG OID637786565 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_392087 
Protein GI78486162 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0267535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCA CTGTATTTAC TTCCGAATCC GTTTCCGAAG GCCATCCAGA TAAAATTGCA 
GATCAAATTT CCGACGCAAT GTTGGATGCC ATTATGAAAC AAGACCCAAA AGCACGTGTG 
GCGTGCGAAA CGTTTGTTAA AACGGGCATG GTCATGCTGG GCGGTGAAAT CACGACATCG 
GCTTGGGTGG ATCAGGAAGA ACTGGTTCGT CAAGTCGTTA ATGACATTGG CTACAACCAT 
GGTGATTTAG GCTTTGACGG CGAAACCTGT GCAGTACTGA GCTCCATCGG CAAACAATCA 
CCCGAAATTG CTCAAGGTGT GGATGAATAC GAGGATCACG AACAAGGTGC CGGTGACCAA 
GGGCTGATGT TCGGGTATGC CTCTAATGAA ACCGACGTTC TCATGCCGGC TCCAATTTAT 
TTCGCTCACC GTTTAATGGA AAAACAAGCC GAACTTCGAA AAGCAGGCAA ACTTGACTGG 
TTAAGACCGG ATGCTAAAAG CCAGGTCACT TTACGCTATG AAGATGGCCA GCCTGTTGCC 
GTGGATGCTG TCGTACTTTC GACGCAACAC TCTCCCGAAG TGGATAACAA AGACTTGCAT 
GAAGCCGTCA TGGAAGAAAT CATTAAACCC GTTCTGCCAG AAGGCTGGCT TCATTCCGGA 
ACACAGTATC ACATCAACCC GACTGGGCGT TTTGTCATCG GTGGCCCGGT TGGAGACGCT 
GGGTTGACGG GCCGCAAAAT CATTGTGGAT ACCTATGGCG GCATGGCACG ACATGGTGGC 
GGCGCATTTT CTGGAAAAGA TCCTTCCAAA GTTGACCGCT CTGCCGCTTA TGCCGGACGT 
TATGTCGCAA AGAACATTGT GGCGGCCGGT TTAGCCGACA AATGCGAAAT TCAAGTGTCT 
TACGCGATTG GCGTGGCGGC ACCGACGTCG ATCAGCATTG AAACATTCGG CACGGAAAAA 
GTGGCCGTTT CATTGATTGA AAAACTGGTT CGCGAACATT TTGATTTGCG TCCGAAAGGC 
CTCATTGCCA TGTTGGATCT TTACCGCCCT ATTTATCAAA AAACCGCTTC TTATGGACAT 
TTCGGTCGAG AATTACCTGA GTTCACGTGG GAAAAAACAG ATAAAGCGGC GGCATTAAGA 
GCCGATGCAG GCCTATAA
 
Protein sequence
MTTTVFTSES VSEGHPDKIA DQISDAMLDA IMKQDPKARV ACETFVKTGM VMLGGEITTS 
AWVDQEELVR QVVNDIGYNH GDLGFDGETC AVLSSIGKQS PEIAQGVDEY EDHEQGAGDQ 
GLMFGYASNE TDVLMPAPIY FAHRLMEKQA ELRKAGKLDW LRPDAKSQVT LRYEDGQPVA 
VDAVVLSTQH SPEVDNKDLH EAVMEEIIKP VLPEGWLHSG TQYHINPTGR FVIGGPVGDA 
GLTGRKIIVD TYGGMARHGG GAFSGKDPSK VDRSAAYAGR YVAKNIVAAG LADKCEIQVS 
YAIGVAAPTS ISIETFGTEK VAVSLIEKLV REHFDLRPKG LIAMLDLYRP IYQKTASYGH 
FGRELPEFTW EKTDKAAALR ADAGL