Gene Tcr_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1815 
Symbol 
ID3761387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1989841 
End bp1991025 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content48% 
IMG OID637786559 
Producthypothetical protein 
Protein accessionYP_392081 
Protein GI78486156 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.520553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCA ATCAACAACT CCCCTCGCCT TCTGAAGAGG CGCAACAAAA AAGCCTTTCG 
TTACAACAAA AGATCCGTCA AATGCTTAAA CGCCACGGCA TGATGCCGTT TCCGCGTTTT
ATGGAAATGG CGCTTTACAC TCCCGGACTG GGGTATTACG CCAGTGGTTT GCCAAAGATC
GGCCAACAGG GTGATTTCAT TACCGCCCCG GAAGTGTCGC CTATTTTTTC ACGCTGCCTT
GCTCGACAAG CGGCACAAGT GCTTGAAACA TTGGAAACAC CGAATGTGAT TGAGTTTGGC
GCCGGAAAAG GCACCATGGC AAAAGACATT TTGCTTGAAC TGGACGCTCT AGAACAACCC
ATTGAACAGT ATTATATTGT CGAGCTCAGT GCGGATTTAC GAGCTCGACA ACAAGAAACG
CTTCAAGCAT TACCCGAGAC ATTATTTAAC AAAGTGGTCT GGCTGGACCA ACTACCGAAA
GACCCACTGC AAGCCGTGGT GCTGGCTAAT GAAGTATTGG ATGCCATGCC GGTTGAAAGG
CTTCGCCTAG AAGAAGAGCA GAGTCTTCGT GGCTATGTCA TCTTCAATGA AGACAAACAG
CGATTTGGAT GGGATTATCA CCCGATTACA GACGCCACGC TTCAGAAAGC CAGCAATGCG
ATTTTAAACC TCATCGGCAC CCCGTCAGCG CGGGGGTACG AAACTGAAAT TAATTTAAAC
ATTCACCCTT GGTTGCAATC CATTGCGGAT TTTTTAAGCC AAGGCGCGGT GCTTTTAATC
GATTACGGGT ATAACCGAAA AGAATATTAT CAACCGTCTC GCCATATGGG AACACTGCGT
TGCCACTACC AACACCGAGC CCATGGTGAC CCTTTCTTTT TCCCGGGGTT ACAGGACATC
ACAGCCCATG TCGACTTTAC CAGCGTGGCA GAATCTGGCT TTGACACAGG GTTTAAGGTG
GCCGGTTACA CCACTCAAGC GCATTTTCTA ATGGGCAGTG GGTTACTGGA AATGTCTGGC
GACCCGACTG CCGACATTAC CGAATCGCTT AAAATTGCGC AGCAAATCAA AACATTGACC
TTGCCCGATG AAATGGGTGA GAGCTTCAAA GTCATCGCCT TAACCAAAGA CGTTGACCTT
TCATTAATCG GATTTAAATT ACGCGACTTA CGTCACCAGC TTTAA
 
Protein sequence
MKPNQQLPSP SEEAQQKSLS LQQKIRQMLK RHGMMPFPRF MEMALYTPGL GYYASGLPKI 
GQQGDFITAP EVSPIFSRCL ARQAAQVLET LETPNVIEFG AGKGTMAKDI LLELDALEQP
IEQYYIVELS ADLRARQQET LQALPETLFN KVVWLDQLPK DPLQAVVLAN EVLDAMPVER
LRLEEEQSLR GYVIFNEDKQ RFGWDYHPIT DATLQKASNA ILNLIGTPSA RGYETEINLN
IHPWLQSIAD FLSQGAVLLI DYGYNRKEYY QPSRHMGTLR CHYQHRAHGD PFFFPGLQDI
TAHVDFTSVA ESGFDTGFKV AGYTTQAHFL MGSGLLEMSG DPTADITESL KIAQQIKTLT
LPDEMGESFK VIALTKDVDL SLIGFKLRDL RHQL