Gene Tcr_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1807 
Symbol 
ID3761379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1983655 
End bp1985385 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content46% 
IMG OID637786551 
ProductDNA primase 
Protein accessionYP_392073 
Protein GI78486148 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000348842 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAA CGGCTAAAGG AACGATCCCT CGTTCATTTA TTGAAGACTT GCTGGCACGA 
GCCGATATCG TGCAAGTAAT CAATCAGCGG GTGCCGTTAA AAAAAGCGGG CACCAACTAC
AAAGCCTGTT GTCCGTTTCA CGATGAGAAA ACCCCTTCTT TTAATGTCAG TGCCCAAAAG
CAGTTTTATC ATTGTTTTGG CTGCGGAGCC AGCGGCGATG CGCTCAAGTT TTTAACCGAC
TATGACGGTT TGTCCTTTGT CGAAGCGGTT GAAACGCTTG CCGCAATGAA CGGCATGGAA
GTCCCCAGAG AAAAACTCAC CCAGAAACAA GCACAGCAAC AACAAAAAAC ACGCGATTTA
TACGATGTCA TGCACAGCGT GGCAAAATTT TATCGCCAAC AACTCAAAAA CCATCCCACA
TCTGAAGAAG CCAAAACCTA TTTGAAACAA AGAGGGTTAA CCTCTGAAAT CGCCAAAGAA
TTTGTCATCG GTTTTGCCCC GCCTGGTTGG GATAGCTTGG TGTCGAATTT AAAAGCCGAC
GCTACGCTGA AACAGCAACT TGTCGAAACA GGCATGTTGA TTCAAAAAGA AGACGGAAAA
ACTTATGACC GTTTTCGACA TCGAATTATG TTCCCCATTC GAGACGGTCG TGGGCGTGTC
ATTGCCTTCG GGGGTCGAGT TTTATCCTCC GAAGAACAGC CTAAATACTT GAATTCTCCA
GAAACGCCCA TATTCCATAA GACAGTGACC TTGTATGGTT TGTATGAAAT GCGCCAAGCG
CGTCAGCAAG TCAATCATAT TCTGGTCGTT GAAGGCTATA TGGACGTGGT TGCCCTCGCG
CAGTTCGGTA TTCGGAATGC CGTTGCAACC TTGGGCACCG CGATCACCAC CGAACACTTG
GACATTATGT TCCGCCAAGT CAATGAAGTG GTGTTTTGTT TTGATGGAGA TGAGGCCGGT
CAAAAAGCCG CTTGGAAAGC ATTGGAATTG GCGTTGCCTA AAATGCAGGA TACGCGGTCG
ATCAAGTTTT TGTTTTTAGA CCAAGGTGAA GACCCAGACT CGACCGTGCG CCAAGAAGGG
GTTGAAGGGT TTCAAAAACG TATCCAGCAA GCCATGACCC TATCAGGGTT CTTGTTTAAA
GGCTTGATTG GACGTCTGGG CTCTCCGGTC TCCACCGTGG AAGGGCAGCA ACAGTTGATT
GCGTTGGCGA CGCCTTATAT TACCTCCGCG CCAGGTGCTA TGCCAGATTT GCTGACAAAG
GTCTTGTCAG ACTATGTGGA TGTGCCGGTG TGGCGTTTAG GGCAAATTAT GGGGATTCGG
GTTTCCTCTA CCAAGCAGCC CTCTGCGAAG AAGAAAAACG AACAACCTGT TCGAATCAAA
GCGACCAGCA TTGTTTTAAG GTTGATTCGA CTGTTAATGC TGCGTTCTCA TTGGGCGACT
GTGTTTTCAG ACGAATTATT ACAAGAGTTA CAGGAATCGC ATAATGCAGA GTTTCGCTTT
TTAGCGCAAT CGATTCAAGT GTTAAAACAA AATGCCTACA TCAGTGAATC GTTAGAAAGC
TGGTTAGGCG AACCGAACCG GGCACATGTT CTAAAACAAG TGTATGCCAT TGTAATCCAA
GAGAATGAAG CGTTTATTGA AAATGAGTTC AAAGCGATTG TGTTGCAGAT TGGGTCAGAA
TTGAAAAAAG AAAAAGACAA AAAATCGTTG CAAAAAAAAT TAATGAATTG A
 
Protein sequence
MNKTAKGTIP RSFIEDLLAR ADIVQVINQR VPLKKAGTNY KACCPFHDEK TPSFNVSAQK 
QFYHCFGCGA SGDALKFLTD YDGLSFVEAV ETLAAMNGME VPREKLTQKQ AQQQQKTRDL
YDVMHSVAKF YRQQLKNHPT SEEAKTYLKQ RGLTSEIAKE FVIGFAPPGW DSLVSNLKAD
ATLKQQLVET GMLIQKEDGK TYDRFRHRIM FPIRDGRGRV IAFGGRVLSS EEQPKYLNSP
ETPIFHKTVT LYGLYEMRQA RQQVNHILVV EGYMDVVALA QFGIRNAVAT LGTAITTEHL
DIMFRQVNEV VFCFDGDEAG QKAAWKALEL ALPKMQDTRS IKFLFLDQGE DPDSTVRQEG
VEGFQKRIQQ AMTLSGFLFK GLIGRLGSPV STVEGQQQLI ALATPYITSA PGAMPDLLTK
VLSDYVDVPV WRLGQIMGIR VSSTKQPSAK KKNEQPVRIK ATSIVLRLIR LLMLRSHWAT
VFSDELLQEL QESHNAEFRF LAQSIQVLKQ NAYISESLES WLGEPNRAHV LKQVYAIVIQ
ENEAFIENEF KAIVLQIGSE LKKEKDKKSL QKKLMN