Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1807 |
Symbol | |
ID | 3761379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1983655 |
End bp | 1985385 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786551 |
Product | DNA primase |
Protein accession | YP_392073 |
Protein GI | 78486148 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000348842 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAAAA CGGCTAAAGG AACGATCCCT CGTTCATTTA TTGAAGACTT GCTGGCACGA GCCGATATCG TGCAAGTAAT CAATCAGCGG GTGCCGTTAA AAAAAGCGGG CACCAACTAC AAAGCCTGTT GTCCGTTTCA CGATGAGAAA ACCCCTTCTT TTAATGTCAG TGCCCAAAAG CAGTTTTATC ATTGTTTTGG CTGCGGAGCC AGCGGCGATG CGCTCAAGTT TTTAACCGAC TATGACGGTT TGTCCTTTGT CGAAGCGGTT GAAACGCTTG CCGCAATGAA CGGCATGGAA GTCCCCAGAG AAAAACTCAC CCAGAAACAA GCACAGCAAC AACAAAAAAC ACGCGATTTA TACGATGTCA TGCACAGCGT GGCAAAATTT TATCGCCAAC AACTCAAAAA CCATCCCACA TCTGAAGAAG CCAAAACCTA TTTGAAACAA AGAGGGTTAA CCTCTGAAAT CGCCAAAGAA TTTGTCATCG GTTTTGCCCC GCCTGGTTGG GATAGCTTGG TGTCGAATTT AAAAGCCGAC GCTACGCTGA AACAGCAACT TGTCGAAACA GGCATGTTGA TTCAAAAAGA AGACGGAAAA ACTTATGACC GTTTTCGACA TCGAATTATG TTCCCCATTC GAGACGGTCG TGGGCGTGTC ATTGCCTTCG GGGGTCGAGT TTTATCCTCC GAAGAACAGC CTAAATACTT GAATTCTCCA GAAACGCCCA TATTCCATAA GACAGTGACC TTGTATGGTT TGTATGAAAT GCGCCAAGCG CGTCAGCAAG TCAATCATAT TCTGGTCGTT GAAGGCTATA TGGACGTGGT TGCCCTCGCG CAGTTCGGTA TTCGGAATGC CGTTGCAACC TTGGGCACCG CGATCACCAC CGAACACTTG GACATTATGT TCCGCCAAGT CAATGAAGTG GTGTTTTGTT TTGATGGAGA TGAGGCCGGT CAAAAAGCCG CTTGGAAAGC ATTGGAATTG GCGTTGCCTA AAATGCAGGA TACGCGGTCG ATCAAGTTTT TGTTTTTAGA CCAAGGTGAA GACCCAGACT CGACCGTGCG CCAAGAAGGG GTTGAAGGGT TTCAAAAACG TATCCAGCAA GCCATGACCC TATCAGGGTT CTTGTTTAAA GGCTTGATTG GACGTCTGGG CTCTCCGGTC TCCACCGTGG AAGGGCAGCA ACAGTTGATT GCGTTGGCGA CGCCTTATAT TACCTCCGCG CCAGGTGCTA TGCCAGATTT GCTGACAAAG GTCTTGTCAG ACTATGTGGA TGTGCCGGTG TGGCGTTTAG GGCAAATTAT GGGGATTCGG GTTTCCTCTA CCAAGCAGCC CTCTGCGAAG AAGAAAAACG AACAACCTGT TCGAATCAAA GCGACCAGCA TTGTTTTAAG GTTGATTCGA CTGTTAATGC TGCGTTCTCA TTGGGCGACT GTGTTTTCAG ACGAATTATT ACAAGAGTTA CAGGAATCGC ATAATGCAGA GTTTCGCTTT TTAGCGCAAT CGATTCAAGT GTTAAAACAA AATGCCTACA TCAGTGAATC GTTAGAAAGC TGGTTAGGCG AACCGAACCG GGCACATGTT CTAAAACAAG TGTATGCCAT TGTAATCCAA GAGAATGAAG CGTTTATTGA AAATGAGTTC AAAGCGATTG TGTTGCAGAT TGGGTCAGAA TTGAAAAAAG AAAAAGACAA AAAATCGTTG CAAAAAAAAT TAATGAATTG A
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Protein sequence | MNKTAKGTIP RSFIEDLLAR ADIVQVINQR VPLKKAGTNY KACCPFHDEK TPSFNVSAQK QFYHCFGCGA SGDALKFLTD YDGLSFVEAV ETLAAMNGME VPREKLTQKQ AQQQQKTRDL YDVMHSVAKF YRQQLKNHPT SEEAKTYLKQ RGLTSEIAKE FVIGFAPPGW DSLVSNLKAD ATLKQQLVET GMLIQKEDGK TYDRFRHRIM FPIRDGRGRV IAFGGRVLSS EEQPKYLNSP ETPIFHKTVT LYGLYEMRQA RQQVNHILVV EGYMDVVALA QFGIRNAVAT LGTAITTEHL DIMFRQVNEV VFCFDGDEAG QKAAWKALEL ALPKMQDTRS IKFLFLDQGE DPDSTVRQEG VEGFQKRIQQ AMTLSGFLFK GLIGRLGSPV STVEGQQQLI ALATPYITSA PGAMPDLLTK VLSDYVDVPV WRLGQIMGIR VSSTKQPSAK KKNEQPVRIK ATSIVLRLIR LLMLRSHWAT VFSDELLQEL QESHNAEFRF LAQSIQVLKQ NAYISESLES WLGEPNRAHV LKQVYAIVIQ ENEAFIENEF KAIVLQIGSE LKKEKDKKSL QKKLMN
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