Gene Tcr_1761 details

Gene Information

• Locus tag: Tcr_1761
• ID: 3761528
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 1921946
• End bp: 1923874
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637786499
• Product: ABC transporter related
• Protein accession: YP_392027
• Protein GI: 78486102
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCTAC TTTTTTTGCG CGATATGTTC TTGAGTTACG GAACGCACAC CCTTTTAAAT 
AAAGTTTCCT TTAAAGTCGA AGCCAATGAA CGCGTCTGTA TCGTGGGACG CAATGGCGAA 
GGCAAATCCA CTCTACTGAA AGTGATTGAA GGCAGCGTTC AGGCCGACGA GGGAACACGG 
ATTGTGCAAG ATGGCGTTAA AATCGCAAAA CTACAACAAG AAGTGCCTAA CGATTTAGCG 
GGAAGCGTTT TCCATATTAT TGCGTTGGGA CTGGGTGACA TCGGCCATCA TATTGAAGAA 
TTTCATCGTC TAAGCCATGC CATCTCGGAA AACTATACCG ATGAATTGAT GGCTCAAATG 
ACCAAAGCAC AACAGGCCAT TGATGCACAG GACGGCTGGG ATCTCAATCA AAAAGTAGAG 
ACTATTATTT CCAAGCTGTC ATTGCCAGCC GATGCTGAAT TTTCAGCGCT TTCGGGCGGT 
ATGAAACGCC GGGTATTATT GGCGCAAGCT CTGATCCAAA ACCCGGACAT TCTGTTACTG 
GATGAACCGA CCAACCATTT GGACATCCCG TCCATTCAAT GGCTGGAAGA CTTTCTTAAA 
AATTTGCAAT GCAGTTTGGT TTTCATCACC CATGATCGCT CCTTCCTGCA AGCCCTTGCC 
ACGCGCATAG TGGAAGTGGA TCGTGGACAG TTACATAACT GGGAATGTGA TTACAAAACC 
TACCTAGAGC GTAAACAAGC CCAATTAGAA TCCGAAGCCA AAACCAATGC CGAGTTTGAT 
AAAAAACTTG CGCAAGAAGA GGTTTGGATT CGGCAAGGCA TCAAAGCACG ACGCACCCGA 
AACGAAGGCC GTGTCCGTGC TTTGGAAAAG CTCAGAGAAG AACATAAAGC ACGACGCTCA 
CAACAAGGCA AAGCGAATTT GCAATTCAAT CAAGGCGCCA ACTCTGGCAA ACAAGTTATT 
GAAGTTGAAG ACTTATCCTT TGCTTGGCCT GACCAGCCCG TTATTCAAGA TTTCTCGACC 
ATGATTTTAC GCGGAGATAA AGTTGGAATT ATTGGCGCCA ATGGTTGCGG CAAATCCACC 
TTACTGAAAC TGTTGCTAGG AAAACTTGAA CCGCAGTCCG GCACAGTGAA ACTGGGAACC 
AACATCCAGA TTGCTTATTT TGACCAGCAC AGAGACCAAT TAGACGAAAA CAAAGTGGTG 
GTTGAAAGTG TGCTTGAAGA GTCCGACTAT GTCGAAATCA ACGGACACCG TAAACACATC 
ATGAGCTATC TGTCTGACTT CTTATTCAGT CCGGAACGAG CCCGACAACA GGTCAAAGCG 
CTATCGGGTG GTGAACGCAA CCGCTTGTTG CTTGCGCGCG TATTCTCCAA ACCGTCTAAC 
CTGTTGATTT TGGATGAGCC GACCAACGAC TTGGATATTG AAACACTTGA GCTGCTAGAA 
GAGCTGTTGC TCGACTATCC TGGCACGGTA CTGATTGTCA GCCATGACCG CGCTTTCTTA 
AACAGCGTGG CTACCAGCTC AATCGTTTTC GATGCACCGG GCGTTGTGAA TGAATATATC 
GGTGGCTATG ATGACTGGCT ACGTCAACGG CCTGAGCATT TAGCCCAATC GGCCACCCTT 
GAAAAACAAC CTGAAAAATC GACCAAAACA GCCAGGCCTG GTGAGAATTT ATCCACAGAA 
GATGAGAGTA AGGCGTCTAA AAAACCTAAA AAGCTGAGTT ATAAAGACCA GCGAGAATAC 
GATGCGCTTC CGCAACAAAT AGAAACGTTA GAACAGGAGC TGGAAAAATT AAACGTGCAA 
ATGAGTGCGC CGGATTTTTA TCAGCAAGAA AATACACAAG CGGTAATTGA CCGCCTGAAT 
ACCTGTGAAT CGGAACTCGA AGCGGCATTT GAACGCTGGG AAAAGCTGGA AGCTCTGTTA 
AACGATTAA 

 

Protein sequence

MALLFLRDMF LSYGTHTLLN KVSFKVEANE RVCIVGRNGE GKSTLLKVIE GSVQADEGTR 
IVQDGVKIAK LQQEVPNDLA GSVFHIIALG LGDIGHHIEE FHRLSHAISE NYTDELMAQM 
TKAQQAIDAQ DGWDLNQKVE TIISKLSLPA DAEFSALSGG MKRRVLLAQA LIQNPDILLL 
DEPTNHLDIP SIQWLEDFLK NLQCSLVFIT HDRSFLQALA TRIVEVDRGQ LHNWECDYKT 
YLERKQAQLE SEAKTNAEFD KKLAQEEVWI RQGIKARRTR NEGRVRALEK LREEHKARRS 
QQGKANLQFN QGANSGKQVI EVEDLSFAWP DQPVIQDFST MILRGDKVGI IGANGCGKST 
LLKLLLGKLE PQSGTVKLGT NIQIAYFDQH RDQLDENKVV VESVLEESDY VEINGHRKHI 
MSYLSDFLFS PERARQQVKA LSGGERNRLL LARVFSKPSN LLILDEPTND LDIETLELLE 
ELLLDYPGTV LIVSHDRAFL NSVATSSIVF DAPGVVNEYI GGYDDWLRQR PEHLAQSATL 
EKQPEKSTKT ARPGENLSTE DESKASKKPK KLSYKDQREY DALPQQIETL EQELEKLNVQ 
MSAPDFYQQE NTQAVIDRLN TCESELEAAF ERWEKLEALL ND