Gene Tcr_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1714 
Symbol 
ID3761012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1874647 
End bp1875099 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content45% 
IMG OID637786451 
Producthypothetical protein 
Protein accessionYP_391980 
Protein GI78486055 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCATT ATCAAACGGT TTTAGTTGCG GTCGATTTTT CCCAACACAG CGATCAAGCC 
ATTGCTCGAG CCAAACAACT GGCTGCCATG TACGGTGCCG AACTTCATTT ATTACATGTC
ATAGAAGAAC CGATGTATCC GGTTTACGAC GACATCAGTT TAACCGCAAC GCCGAATGCT
TGGTTTCCCG ATATCTTGGA AAGTCTGCAA AAGGCAGCCA CCCAAAAACT GCATCATCTA
GCCGAAACAA ACCAAATTCC AACGACGGCT TGTCATATTG TCACTGGGTT CCCTAAAGCA
CAAATCGTTG ACTATGCCAA CCAAATTCAA GCTGACTTAA TTGTCATGGG ACGACACGGT
ATGTCCTTTT TTGACAAACT GATCGGCTCA ACCACCGACA ATGTTTTACA CCAAGCCCAT
TGCGATGTGA TGACCGTCAC ACTCGATTCT TAA
 
Protein sequence
MHHYQTVLVA VDFSQHSDQA IARAKQLAAM YGAELHLLHV IEEPMYPVYD DISLTATPNA 
WFPDILESLQ KAATQKLHHL AETNQIPTTA CHIVTGFPKA QIVDYANQIQ ADLIVMGRHG
MSFFDKLIGS TTDNVLHQAH CDVMTVTLDS