Gene Tcr_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1707 
Symbol 
ID3761005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1868009 
End bp1868728 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content42% 
IMG OID637786444 
Producthypothetical protein 
Protein accessionYP_391973 
Protein GI78486048 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.182955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACG TATTACAACT TGATAACGAA ACAATTGAAG TCGTTAAAAC CTCAAGGCGA 
GGGTCGATTG GACTCAAGGT TGAACCCGAT CGCATTGCGT TAATGGTTCC AAAGCAGTTT
TCCGATTTAA CGATTGAGTC TTTAATCGCA AATGAAAAAG ACTGGTTGCT TGATCAAATT
CGTAAACATC AGGCTGAAAT GCCGAAAAAG CTGGTTTTGA AGCCCGGGCA TGAGTTATTG
TTGTTTGGTG ACAAGATTTT GTATAAAGAA GACCATAAAA CGTCGGTTAA ATCGCTTCAA
GTGATACTGG AAGGTTCTTG TTTAACAGCC TATATGCAAA CAGCTCGTGC TTTAAAGGCG
CCGGAGATCA CGGCCAGAAA AAAAGTAATA CAGTTTTTAA CCCAACAACT GCAAGGTTAT
TTAATGGAAA AGGTGCCCTT GTTTGCTGAA CAAATTGCGG TTTCACCGAC CGAAATAACC
GTACGTAATT ATAAGTCTCG TTGGGGCAGC TGTTATCCTG ATGGTCGAAT TCAATTTAAT
TGGCGGTTGG CGATGGCTCC GAAGGATGTG ATTGATTACG TTATTCAGCA TGAGTTGTGT
CATTTGGTTC ATCCGAATCA TTCCCCGCAA TATTGGCAAC TGGTGGCTGA ACATTGCCCG
GACTATGAAA CGCATAAGCA GTGGCTAAAA GAAAATGGCA CCGCATTAAT TCATTTTTAA
 
Protein sequence
MAHVLQLDNE TIEVVKTSRR GSIGLKVEPD RIALMVPKQF SDLTIESLIA NEKDWLLDQI 
RKHQAEMPKK LVLKPGHELL LFGDKILYKE DHKTSVKSLQ VILEGSCLTA YMQTARALKA
PEITARKKVI QFLTQQLQGY LMEKVPLFAE QIAVSPTEIT VRNYKSRWGS CYPDGRIQFN
WRLAMAPKDV IDYVIQHELC HLVHPNHSPQ YWQLVAEHCP DYETHKQWLK ENGTALIHF