| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1697 |
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| Symbol | |
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| ID | 3760975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1852055 |
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| End bp | 1855603 |
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| Gene Length | 3549 bp |
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| Protein Length | 1182 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637786434 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_391963 |
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| Protein GI | 78486038 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA ACTTGGATTT TGGAACGCCT GACAGTATGA ATGATTCTCT GGCCGAAGCG
ATTAATCCGT TAAAAAATCT GATTTTGGAT GAGGCGTTGC CGGATGGCAA AGCCCGTTTT
CAAGCGATTC ACCCACAGCA TTCTTATATT GTTCAAGCGC CCGCCGGGTC GGGTAAAACC
GCACTTTTGA CACAACGCTT TTTGGCGTTA TTGTCTCAAG TTGAAACACC GGAGCAAGTG
GTGGCGATGA CCTTTACCAA AAAAGCCGCG GCGGAAATGC GAGAACGTAT TTTGGAAGCG
TTGCACTTCG GGCTGACCTC GCTGGACGAA TCCGCATCGA TTTATGATCA AAACACCTGG
CACTTAGCAC AAGCCGCTTT ACAGAATAAC CAACAACGTC AATGGAAATT ATTGGACAAT
CCAAATCGGT TACGGATTCG AACCATTGAT TCCATGAATG GATATCTGGT TCAGCAGATG
CCTTTATTGT CGCGTTTGGG CGCGCAGCCT CAAGTCGCGA GTATGAATGA CACCTTGTAT
CTGAAAGCGG TGCGTTTGGC GTTAAAAGAC GCTGACACGA CGGAAGCTTC TGCCAGTTTA
TTGCGACTGG TCAATGGTAA TTATCGCAGT GCCGAAAATT TGTTGGTGAC GATGCTGAAA
AAGCGCGACC AATGGATGGG TGCGCTATTG TCGTATGGCC AGGATGCAGA AGCACAAGAG
CGCGCGGAGT TGGAAAAGGC TTTAGCTTTA TTGGTCTCAC AGGAAAAATC ACAAGCCATT
GACACGCTTT ATCCGGTGAT GCCTTTGTTG CAACAGATAG CGGAATTTGC CGCATTTGCC
ATGCAAAATG ACCAGCCTCA ACTGAAACCG TTGGTGGATG ACCCTTTAAC GAAGGAATCA
GATTTAGCGG CCTGGCAAGC ATTGGGAGAC TGGATTCTTT CGACTCAAGG CAAGTTTTTG
AAGACGGTCA CGGTCAAAAA AGGGTTTCCA GCCGGTAAAG GGGAAAACAA AGAACAAAAA
GACGCTTTTT TAGCGTTATT GGCGGAATTG AATGTGGCGG ATATCCGAGG ACAGTATGCT
GAAGCGCTGG TGTTATTAAG CCAACTGCCG GAAGGCCATT ACTCCGATGA GCAATGGCAA
AACCTTCGAC ATTTGATTCA ATTGTTACGC CGAACCGTTG CGCATTTGAA ACTGTGTTTT
CAAACAGAGG GCGAGACCGA CTTTATTGAG GTCGCGCAAG CCGCTTCCCA AGCATTGGGG
CATGAACTGG AGCCGACCGA TTTGGCCCAA CAGTTGGACT ACACTTTAAA GCATCTTTTA
ATTGATGAAT TTCAAGACAC CAGTGTCGCG CAATACGATT TAGTGAAAAA AATCGTGGCG
GGTTGGTCAC AGGAAGATGC GCACAGTTTG TTTATTGTCG GCGACCCGAT GCAGTCCATT
TACCGTTTCC GGGAAGCGGA AGTGGGTAAT TTTTTGCAAG CTTGGAAAGG ACGGTTGGGT
GAGGTGCCTT TAACCCCTTT GAGTCTGGAA GTGAACTTTC GTTCTTCAAA AGGCGTAGTG
GATTGGGTGA ATCAAACCTT TGCTAAGGTG TTTCCTAAAA AGAGTTTGAT TGAACAAGGG
GCGGTAAGCT ATGCCCCTGC GGTAGCGTTT TCTGAAGAAG CTTCACCTGC GGTTTATACT
CATTGGGCTT TGCAACAGTC GGCGTGGGAG GAGGCAGCTG ATATTTTAAC GTTGATTCAA
GAACGGTTAT CAACTTTGAA AACAGATGCC GCAATTGGAG TATTGGGTCG AAGCCGTTCG
CACTTAATGT GCGTGGCGAT TCAGCTTAAA CAAGCGGGCA TAGCTTTTCG TGCGGTTGAG
CTGGAAGGCC TGAAGGATCG GCAGGAAATT CAAGATTGCG AAGCCTTGAC CCGATCGTTG
CTGCATTTGG GCGACCGACC TGCGTGGATC GCTTTATTAC GTTCACCTCT CGTTGGGTTG
TCGTTAACGG ATTTGTACCG TTTATTGGGC GAGAATGACG ACTATTTTCA GACGCCGGTC
TGGGAAACCT TGCAGGACAA AACCCATTCC GGATGGCAAC AGTTATCCGA TGCTGGGCGT
CAACAGTTGG GGCGGAGTTT GCCTGTGCTT GAAAAAGCGC TGAATTCGAT GGGATCTTAT
GCCTTGGAAG TGTTGGCGCA TGAGACTTGG TTGGCGCTGG ACGGACCGCA AACAGTTGAA
TCGGCGATGG CCTTGCAGAA TGTGGATGCC TTTTGGATGA TGCTTGGCAA TTTGGAAGCG
CAACATGATG TCTCGGCGTT AACGGCGAAA GGACTGTCGG ATACATTGGA GACGCTCTAT
GCCTTGCCCG ATGCCTCGGA AGCCAGCCAG AAAATCGAGC TGATGACGAT GCATAAGTCG
AAAGGGTTGG AGTTTGATAC CGTGATTTTA CCGGGATTGG GGCGTCCGCC TCGTTCCGAT
GAAAAACAAT TGTTGTCTTG GTTGTCTTTC AAAGGACAGC ATGAGCAATC GTATCTGGTG
ATTGCACCGT TTGAACAAAA GGGCAAAGCG GCACAAAAAC AGCCAGGCCT GGCGAATGTG
ATTAAGCGGT ATGAAGAAAT CAAACAGAGC TATGAATTGT CGCGCTTGTT GTATGTTGCC
TGTACGCGTG CCAAACAGCA GCTGCACTTG TTCGGCAGTG TGGCGGTTTC TGAAAAAGCA
TTTAATGGCG ACGCGGCGTT GATGCCTAAG AAGAAAAGCT TGTTGGAATG TTTGTGGTCG
TTAGAGGCTC CGGCTTTTGA AGTGCTTTTA ACCGACTATC AATTCAAAGA CGTGGAAGAC
AATACTCAGG AATTGTTACC GAAGGTCAGC CGTCTGCCAT TGGAAAGACA AGGTTTTTGG
CAAACGCAAA GAGAGGAATC CGAATTGGTT AAAGCCGCTC GAATGGGTGT TGTGGAGGAT
GAAGATACGG ATGAATTGCT TAAAGTTGAT GTCGCGGCTC CGTCTGCAAC ACCCCTTTCT
TCTTTGCACG GTGGGGTTTT GGCGAAAACA GTTGGTAATT TTGTGCATGC GGTTTTTGAA
CAGTGGGCGC AGCAGGATCT TTCAAGCTGG GATGCTACCC TGCTTGAATC ACAGCGAGAA
CGGTATCGTT ATGGGTTGAT GCAGATGGGC TTGAATCGTG AGTTACTGAA GACTGCGTTG
GAGCGCGTAA TGATGTCTTT AAGCCATGCG TTACATAATC CCAAAGTTCG TTGGGCCTTA
TCACGAGAGC ATACCGAGTC GGCTGTTGAA TTACCTTTGA GCGCCAAAGA AGAAACCGGG
CAGTCAAATC ATATTATTGA TCGCACATTC GTGGACGAGC AAAATACGCG CTGGATTATT
GACTATAAAA CCAGTGTGTT TGATCTGGAT AAATCTGAAC AAGATAAAAA AGCATTTTTG
CAGTCTCAAA TAGACGTCTA CACGCCACAA CTTGAACGAT ACGGTCAGTT GTTGGGGGCA
ATAGAGAACC GACCTCAAAA AAGAGTGCTT TATTTCAGTT ATTTAGACGA ATGGATTGAG
TTGAATTGA
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| Protein sequence | MNLNLDFGTP DSMNDSLAEA INPLKNLILD EALPDGKARF QAIHPQHSYI VQAPAGSGKT
ALLTQRFLAL LSQVETPEQV VAMTFTKKAA AEMRERILEA LHFGLTSLDE SASIYDQNTW
HLAQAALQNN QQRQWKLLDN PNRLRIRTID SMNGYLVQQM PLLSRLGAQP QVASMNDTLY
LKAVRLALKD ADTTEASASL LRLVNGNYRS AENLLVTMLK KRDQWMGALL SYGQDAEAQE
RAELEKALAL LVSQEKSQAI DTLYPVMPLL QQIAEFAAFA MQNDQPQLKP LVDDPLTKES
DLAAWQALGD WILSTQGKFL KTVTVKKGFP AGKGENKEQK DAFLALLAEL NVADIRGQYA
EALVLLSQLP EGHYSDEQWQ NLRHLIQLLR RTVAHLKLCF QTEGETDFIE VAQAASQALG
HELEPTDLAQ QLDYTLKHLL IDEFQDTSVA QYDLVKKIVA GWSQEDAHSL FIVGDPMQSI
YRFREAEVGN FLQAWKGRLG EVPLTPLSLE VNFRSSKGVV DWVNQTFAKV FPKKSLIEQG
AVSYAPAVAF SEEASPAVYT HWALQQSAWE EAADILTLIQ ERLSTLKTDA AIGVLGRSRS
HLMCVAIQLK QAGIAFRAVE LEGLKDRQEI QDCEALTRSL LHLGDRPAWI ALLRSPLVGL
SLTDLYRLLG ENDDYFQTPV WETLQDKTHS GWQQLSDAGR QQLGRSLPVL EKALNSMGSY
ALEVLAHETW LALDGPQTVE SAMALQNVDA FWMMLGNLEA QHDVSALTAK GLSDTLETLY
ALPDASEASQ KIELMTMHKS KGLEFDTVIL PGLGRPPRSD EKQLLSWLSF KGQHEQSYLV
IAPFEQKGKA AQKQPGLANV IKRYEEIKQS YELSRLLYVA CTRAKQQLHL FGSVAVSEKA
FNGDAALMPK KKSLLECLWS LEAPAFEVLL TDYQFKDVED NTQELLPKVS RLPLERQGFW
QTQREESELV KAARMGVVED EDTDELLKVD VAAPSATPLS SLHGGVLAKT VGNFVHAVFE
QWAQQDLSSW DATLLESQRE RYRYGLMQMG LNRELLKTAL ERVMMSLSHA LHNPKVRWAL
SREHTESAVE LPLSAKEETG QSNHIIDRTF VDEQNTRWII DYKTSVFDLD KSEQDKKAFL
QSQIDVYTPQ LERYGQLLGA IENRPQKRVL YFSYLDEWIE LN
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