Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1667 |
Symbol | |
ID | 3760945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1819606 |
End bp | 1821534 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786404 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_391933 |
Protein GI | 78486008 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.301446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATCA TTACCTTGCC GGATGGCTCG AAAAGAGCGT TTGAAGATGC CGTTACTGTC ATGCAAGTTG CTTCGGATAT CGGAGCAGGA TTGGCCAAAG CAACGATCGC GGGTCGTGTG AATGGTCAAT TAAAAGAGGC TAGTGATTTA ATTACGGAGG ACGCCGAGCT TCAGTTGATT ACCCTGAAAG ATGAAGATGG GTTGCATATC ATGCGTCACT CTTGTGCTCA TCTGCTTGGT CATGCACTGA AACAACTTTA TCCCGCTGCT AAAATGGCGA TTGGGCCAGT GGTTGAGAAT GGTTTTTACT ATGATATCGA CATGGAAGAA AAGATTACGC CGGAAGATTT GAAGCAAATC GAAAAGCGTA TGAAAGAACT GGCTAAGACA AAGTATGAAG TCATTAAAGA AATGACGCCG CGCGCAGAAG CGTTAGCCAC GTTCAAAGAA CGTCAGGAAG ACTATAAAGT TGAGTTGATA GAAGACATGC CTGACGAAAC TGAGTTTGGT TTGTATCATC ATCAAGAATA CATTGATATG TGTCGTGGTC CACACGTTCC GAATATGGGC TTTATTAAAG CCTTTAAGTT GACACATGTG GCCGGTGCTT ATTGGCGCGG CAATTCAGAT AATAAAATGC TGCAACGTAT CTACGGTGTG GCGTTTGCTG ATAAACAAGA ATTAAAAGAT TACCTGCGTA TGATGGAGGA AGCTGAAAAA CGCGACCATC GTAAGTTAGG TAAATCGCTT GACTTATTCC ATGTCGATGA GTTGGCGCCG GGGATGGCTT TTTGGCACCC TAAAGGCTCA ACGCTTTATC GCGTGGTTGA AAACTATATG CGTCAACAGT TGGTTGAAAA CGATTACCAG GAAATTCGTA CGCCATTGAT TATGGATCGT ACTTTATGGG AAAAATCCGG CCACTGGGAC AAGTTCAAAG ACAATATGTT TACGACAGAA ACGGAAAACC GTGATTACGC TGTTAAGCCG ATGAACTGTC CGGGTCATAT TCAAGTGTAT AACCATAACT TAAGCAGTTA TCGTGATCTT CCGATCCGTT TAGCGGAGTT TGGTTTGGTG CATCGAAATG AGCCATCTGG AACATTGCAT GGCTTAATGC GTGTGCGTTC CTTTACCCAG GATGATGCGC ATATTTTCTG TACCCCTGAA CAAATTAAAG AAGAAGTTCA AGCCTGTATC GATTTGGTCT TTAACACCTA TGCCGATTTT GGGTTTGACA ATATTCAAGT GAAGTTTTCA ACACGCCCTG AACAGCGCGT GGGCGAGGAT GATGTTTGGG ATTTGGCGGA AGAAGCGCTC GAGCAAACCT TGAAAGATGC CAATTTAGAG TATGCCTTGC AGCCAGGTGA AGGGGCTTTT TATGGCCCTA AGATCGAATT CCAACTAAAA GACTGTATCG GGCGTGTTTG GCAATGCGGT ACGATTCAGC TGGATTTCTC GATGACGCAA GAAGAGCGAC TGAATGCTGT TTATATCGGA GCCGACAATG AAAAGCATCA CCCAGTGATG ATTCACCGTG CGATCTTAGG GTCGCTTGAG CGATTTGTGG GTATTTTGGT TGAGCATTAT GAAGGAAAGT TCCCAACTTG GTTAGCGCCA ACTCAACTTG TTATTGCATC AATTGCAGAT GTGCATAATG AATATGTGAA CGATTTCGCT AAAAAATTGA AAAAACATGG GTTTAGAGTT GAATCGGACT TGAGAAATGA GAAGGTTGGG TTTAAAATTC GCGAACATAC TTTACAGCGT GTGCCATATA TTTTAGTGGT CGGTGACCAA GAAATGGAAA ATGGTACCGT GAATGTACGT GCCCGTGGGG GTGAAAACTT AGGCAGCTTC TCATTTGAAG AATTGATTGA TCACCTGTCT GAAGATGTTT CTCGCCTGGG CCGTATTGTT GAATCATAG
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Protein sequence | MPIITLPDGS KRAFEDAVTV MQVASDIGAG LAKATIAGRV NGQLKEASDL ITEDAELQLI TLKDEDGLHI MRHSCAHLLG HALKQLYPAA KMAIGPVVEN GFYYDIDMEE KITPEDLKQI EKRMKELAKT KYEVIKEMTP RAEALATFKE RQEDYKVELI EDMPDETEFG LYHHQEYIDM CRGPHVPNMG FIKAFKLTHV AGAYWRGNSD NKMLQRIYGV AFADKQELKD YLRMMEEAEK RDHRKLGKSL DLFHVDELAP GMAFWHPKGS TLYRVVENYM RQQLVENDYQ EIRTPLIMDR TLWEKSGHWD KFKDNMFTTE TENRDYAVKP MNCPGHIQVY NHNLSSYRDL PIRLAEFGLV HRNEPSGTLH GLMRVRSFTQ DDAHIFCTPE QIKEEVQACI DLVFNTYADF GFDNIQVKFS TRPEQRVGED DVWDLAEEAL EQTLKDANLE YALQPGEGAF YGPKIEFQLK DCIGRVWQCG TIQLDFSMTQ EERLNAVYIG ADNEKHHPVM IHRAILGSLE RFVGILVEHY EGKFPTWLAP TQLVIASIAD VHNEYVNDFA KKLKKHGFRV ESDLRNEKVG FKIREHTLQR VPYILVVGDQ EMENGTVNVR ARGGENLGSF SFEELIDHLS EDVSRLGRIV ES
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