Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1662 |
Symbol | |
ID | 3760940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1814551 |
End bp | 1816932 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786399 |
Product | phenylalanyl-tRNA synthetase, beta subunit |
Protein accession | YP_391928 |
Protein GI | 78486003 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA GTGAAAGTTG GTTAAGAGAA TGGGTGAATC CTGAATGGGA TACCAATACC CTAGCAGAAG AATTAAGTTT AGCAGGCTTG GAAGTCGATG GGATCGAACC TGTTGCTCCG GCCTTTACCA ATGTGGTGGT GGCCAAAGTT ATTTCGGTTG AGAAACATCC GGATGCCGAT AAATTGAATG TCACCCAAGT TGACATCGGT GCCGATGAAC CGGTCCAGAT TGTGTGTGGT GCCAAAAACG TTGTCGCAGG AATGAAAGCT TGCTGCGCAA CCGTTGGTGC GGTCTTACCA GGTGATTTCA AAATTAAAAA AGCCAAGTTA CGTGGCGTGC CTTCAAACGG CATGCTGTGT GGTGCCAATG AGCTTGGACT GCCGGATGAC GGTGTGGATG GTCTGCATGT GTTACCAGCC GATGCACCCG TTGGAACCGA TTTACGTGAA TATCTGGATC TGGACGATCA GGTGATTGAT GTTGATTTGA CGCCAAACCG CGCCGATTGC TTAAGTATTG CGGGTGTGGC AAGAGATGTG GCCGCGATTG GTAATGTTCC ATTTAAACAA CCTTTTGACA ATGTGACGGT CGATAAGTCG GGCGACTGTT CTCAGTCTGT TAATGTCGTT GATGCGCATG GGTGCCCAAA ATATTTAGGG TGTCTGGTAG ACGGTTATGA CACCACCGCT GAAACACCAT CATGGATGAA ACAACGCATT GAAAGAGCCG GTCTTTCGCC TAAAAATTTG ACGGTTGATA TTACGAACTA TGTGATGCTG GAGTTAGGAC AGCCGATGCA TGCTTTTGAT GCTGACAAGC TTCAAGGCGA TATTCAAGTT CGTATGGCGC ATCCAAATGA AAAACTGATG ACGCTGGATG AGAAAGAGCT GACTTTAAAA GCTGATACGT TGGTGATTGC CGATGATAAT GGACCGGTTG CGTTAGCCGG AATTATGGGC GGATTGAATT CTTCGGTTTC CGATACAACA ACGCGACTCT TTTTTGAATG CGCACATTTT GCACCGTTAA GTATTATTGG TAAAGCACGC CAGTATGGTC TGCACACGGA TTCTTCACAC CGATTTGAAA GAGGAGTGGA TGCTTTTTTA CCTGAAAAAG CACTTGAACG AGCATTGCAA TTATTTACTG AAATTGCCGG TGGGCGAGTT TCAAATCTGG TTGCGGTAAT CAATGAGTTG AATCTCCACC AGCCAAAAGC AATTCAATTA CGCCCTGAAC GTATTGTGAA ATTATTAGGC GTTGAGATTG CTGATAACGA TGTTGAAGCC ATTTTCAAAC GTTTAAATTT TAAAGTGGAG CAGAACGCAT CAGGTTGGGC GTTGACAGCA CCGTCTTATC GTTTTGATAT GGAAATTGAG GCCGACTTGA TTGAAGAAGT GGGTCGCGTC TTTGGTTACA ACAATTTACC TGAAACGGAA GTGCAGGCTC CAATGCGTTT ACCGACGTTA CCTGAATCTG AGCAAGAGCT GTATTTGGTT CGTAAAGCCT TGGTAAACCG TGGTTTTCAT GAAGTTGTGA CCTATTCCTT TGTGGAAGAG ACCTTACAGC AAAAAATGAT GCCGAGCATT CCGTATCTTT GTTTACAAAA TCCGATTTCG GATGATATGA AAGCCATGAG AACAACATTG TTCCCGGGGC TTTTGCAAAC GATTTCCTAT AATCAAAAGC GTCAGCAAAA CCGAATTCGT ATTTTTGAAT CTGGTTTGGT GTTTACTCGC TACAATGAAG AAACGCAACA AACGCCTGTG ATTGGCGGCG CCATTGTGGG CGATTTGAAT CCAGCTAATT GGTCAGGTGA AAACCGTCCA GTGGATTTTT ATGATTTAAA AGGCGATGTG GAAACCTTGT TGGCAATGAG TCATGTTCAA GATAAAGTGC GTTTTGAGCC AACCGAATTT GCCATTTTCC ATCCTGGCCA ATCTGCCGCA TTAATTTTAA ATGGTCAGAC CGTTGGTTTG ATGGGGCAGC TTCATCCAGG CCTGGTTAAA TCAGCCGGTG TTTCAGGGAA AGTCTATTTA TTCCAAATGG ACTTGGCTAC GATTATGGAA ACTAAAGTTC CAGCGGCCAA ACCCATTTCT AAATTTCCGG AAGTTCAACG CGATTTGGCT TTTGTTGTGG ATGCAGAACT GCCGGTGCAA AAATTACTGG ATGCGATTGA CCATGTTCAA TCCGATATTC TAAAGGCGGT TGAGATTTTT GATATTTACC AAGGTGAAGG AATTGAAGAG ACGCAGAAAA GTATTGCATT GACTCTTAAG ATTCAGCACC AGGATCGTAC TTTACAAGAT GAAGAAGTCG ATCAGTTGAT CGAACAAGTG ATCTTAAAAG CAAAAGAGCA AGTGAACGCA GAATTACGTT AA
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Protein sequence | MKVSESWLRE WVNPEWDTNT LAEELSLAGL EVDGIEPVAP AFTNVVVAKV ISVEKHPDAD KLNVTQVDIG ADEPVQIVCG AKNVVAGMKA CCATVGAVLP GDFKIKKAKL RGVPSNGMLC GANELGLPDD GVDGLHVLPA DAPVGTDLRE YLDLDDQVID VDLTPNRADC LSIAGVARDV AAIGNVPFKQ PFDNVTVDKS GDCSQSVNVV DAHGCPKYLG CLVDGYDTTA ETPSWMKQRI ERAGLSPKNL TVDITNYVML ELGQPMHAFD ADKLQGDIQV RMAHPNEKLM TLDEKELTLK ADTLVIADDN GPVALAGIMG GLNSSVSDTT TRLFFECAHF APLSIIGKAR QYGLHTDSSH RFERGVDAFL PEKALERALQ LFTEIAGGRV SNLVAVINEL NLHQPKAIQL RPERIVKLLG VEIADNDVEA IFKRLNFKVE QNASGWALTA PSYRFDMEIE ADLIEEVGRV FGYNNLPETE VQAPMRLPTL PESEQELYLV RKALVNRGFH EVVTYSFVEE TLQQKMMPSI PYLCLQNPIS DDMKAMRTTL FPGLLQTISY NQKRQQNRIR IFESGLVFTR YNEETQQTPV IGGAIVGDLN PANWSGENRP VDFYDLKGDV ETLLAMSHVQ DKVRFEPTEF AIFHPGQSAA LILNGQTVGL MGQLHPGLVK SAGVSGKVYL FQMDLATIME TKVPAAKPIS KFPEVQRDLA FVVDAELPVQ KLLDAIDHVQ SDILKAVEIF DIYQGEGIEE TQKSIALTLK IQHQDRTLQD EEVDQLIEQV ILKAKEQVNA ELR
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