Gene Tcr_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1643 
Symbol 
ID3760921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1795861 
End bp1796946 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content31% 
IMG OID637786380 
Producthypothetical protein 
Protein accessionYP_391909 
Protein GI78485984 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATTC AACCTAAAAA ATATCAAATT AATATTGATC CTCGTATTCT TGAATTATTG 
GGGCCAAATT TATACACCAA TATTTATTAT GTTTTAGCTG AACTAGTCGC AAATGCTTAT
GATGCAAATG CAAAAAATGT TTATATTATT TCTGATAACT CAACCATTAC TGTAGAAGAT
GATGGGAATG GAATGACATA TGAATCTGGA GTAAAAAAGT TCCTAAATGT TGCCCAAGAA
AGTAGAACTA ATGAAGAAGA TTTGTATGTA GAGGGGAGTA ATAGGTTAAG GAAAAAAATG
GGACGAAAAG GAGTTGGTAA GTTAGCAGCA CTGGCCGTAT CTAAAGAAGT AGAAGTAAAA
ACTATAAGAG GTGGTGACAA GTCAGGATTT ATATTATCTA GAGAAGTTGG AGAAGATCAC
TCTTTAGAAC CAATTGAAGA AGAAGATATT CAGTTTTTGA GCGTAAGGGA TCATGGAACC
GCTATTGTAA TGAAGGCTCC TCAGTATAAA ATTCATAAGA CTCTCAATGC CGCAAAAAAA
AATCTTTTAA AAATATTTCC TCTAGTAAAT CAAGACTTTC AAATTCATCT CCAAATAGGT
AATAAAAAAG AAGTTATTGA TTCTTTTGAA CAAGAAATAA TAAATGCTCT TGGTTGTCTT
ATAACTTTGG GTGACGAGTT TTCATTTTTG AATAATTCAT TTAATAGTCA ACTGTTAATG
TCCTCAGAAA AAGAGGATTC ATTAAATATA AAAAAACAAG CTTATGTAAA AAAACTCAAG
CTAGAGAGAA AGGATGGAGA AGAAGCTGAG TTTAGTCTTG AAATTAAAGG ATGGATTGGA
GCATATAGAT CTTCAAGAGG TAAGAAGAAA GATCAGACAG ATTTCCCTGA TAATTTTATT
TCAATAATTT CAAATAAAAA ATTAGGAGAA TTTAATATTC TTCCTTTAGT TGGAAAAAAC
GCCCTTAATG AAGTTTATGT TGTAGGACAA CTTCATATAG ATTTATTTGA AGAGACAACT
CTACCGGATA TGGCTTGTAG TGGTCAAGTT TTTTTGGCCA CCGATTTAGA GCAATTTGCC
CAATAA
 
Protein sequence
MGIQPKKYQI NIDPRILELL GPNLYTNIYY VLAELVANAY DANAKNVYII SDNSTITVED 
DGNGMTYESG VKKFLNVAQE SRTNEEDLYV EGSNRLRKKM GRKGVGKLAA LAVSKEVEVK
TIRGGDKSGF ILSREVGEDH SLEPIEEEDI QFLSVRDHGT AIVMKAPQYK IHKTLNAAKK
NLLKIFPLVN QDFQIHLQIG NKKEVIDSFE QEIINALGCL ITLGDEFSFL NNSFNSQLLM
SSEKEDSLNI KKQAYVKKLK LERKDGEEAE FSLEIKGWIG AYRSSRGKKK DQTDFPDNFI
SIISNKKLGE FNILPLVGKN ALNEVYVVGQ LHIDLFEETT LPDMACSGQV FLATDLEQFA
Q