Gene Tcr_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1616 
Symbol 
ID3760876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1770446 
End bp1771906 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content46% 
IMG OID637786353 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_391882 
Protein GI78485957 
COG category[F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCT TGCAAGAAGC CCTTACTTTT GATGATGTTT TATTGGTGCC AGCACACTCG 
AATGTGTTGC CATCTGATGT TTCATTAAAA ACTCATCTGA CTCGTAACAT TGAATTGAAT
ATCCCATTTG TATCGGCTGC AATGGACACG GTGACAGAAG CGCGTTTAGC CATCTCAATG
GCACAAGAAG GTGGGATCGG TATTGTTCAT AAAAACATGA CAATCGATGA ACAAGCAGAT
GTGGTGACCA AAGTTAAAAA ATATGAGCAC GGTGTGGTTT TAGAACCGAT TACGGTTCAA
GTAAACGATA CGGTTCAAGA TGTATTGGAA AAAACCAAGC AAAACCGAGT GTCTTCTGCT
CCTGTAATGG ACGGCGATGA TCTGGTCGGA ATCGTGACCA GCCGTGATTT AAGATACTTA
GTTGACTTAG CACAACCGGT TTCTCAAATT ATGACGCCTA AAGATCGCTT AGTGACGGTT
AAAGAAAAAG TGAAGCGTGA AGAAGTTCTA GAATTATTGC ATCAGCATCG TTTAGAGCGT
TTGTTGGTGG TGGATGATAA CTTTAAATTA AAAGGCATGA TCACCGTTAA GGACATGGAA
AAATCGTCTG AGCATCCTTA TGCAGCAAAA GACTCTAATG GACGTTTGCG AGTTGGTGCG
GCGGTTGGAA CCGGTGTTGA AACTTATGAC CGTGTTGCAG CCTTAGTGAA AGCTGGGGTT
GATGTCATCA TTGTGGATAC CGCTCATGGT CACTCGCAAG GCGTATTGGA TAAAGTGAAA
TGGGTTAAAG AAAACTACCC TCAAATTGAT GTTGTGGGCG GGAATATTGC GACGGCAGAA
GCGGCGTTGG ACTTGGTGAA GGCCGGTGCA GATGCGGTTA AAGTCGGGAT TGGACCAGGA
TCCATCTGTA CAACTCGTAT TGTTTCAGGG GTTGGGGTTC CTCAATTGAC GGCCATTGCG
AACGTCGCGG AAGCATTGAA AGATAAAGGC ATTCCATTAA TTGCTGACGG CGGAATTCGT
TTCTCCGGTG ATGTGGCCAA AGCTCTTGTG TCTGGTGCGT CAGCCGTGAT GCTGGGGAGT
ATGTTTGCGG GGACTGAAGA GTCACCAGGC GAAGTGGAAT ACTATCAAGG CCGTGCCTAT
AAGTCATACC GTGGTATGGG GTCTTTAGGC GCGATGTCAC AGAAGCAAGG GTCTTCGGAT
CGTTATTTCC AGTCGTCAAA TGCGGCAGAT AAGTTGGTTC CAGAAGGTAT TGAAGGGCGA
GTCGCTTATA AAGGGCCTTT GGCGCCTATT ATTCATCAGT TGGTCGGCGG TATCCGATCC
AGCATGGGGT ATACCGGTTG TAAGGATATT AAAGAGTTTA ATACCAAACC TTCTTTTGTT
CGTGTATCCG GGGCCGGCAT GGCAGAAAGC CATGTTCACA ATGTTCAGAT AGTTAAGGAA
GCGCCTAACT ACAGAGTCTA A
 
Protein sequence
MRILQEALTF DDVLLVPAHS NVLPSDVSLK THLTRNIELN IPFVSAAMDT VTEARLAISM 
AQEGGIGIVH KNMTIDEQAD VVTKVKKYEH GVVLEPITVQ VNDTVQDVLE KTKQNRVSSA
PVMDGDDLVG IVTSRDLRYL VDLAQPVSQI MTPKDRLVTV KEKVKREEVL ELLHQHRLER
LLVVDDNFKL KGMITVKDME KSSEHPYAAK DSNGRLRVGA AVGTGVETYD RVAALVKAGV
DVIIVDTAHG HSQGVLDKVK WVKENYPQID VVGGNIATAE AALDLVKAGA DAVKVGIGPG
SICTTRIVSG VGVPQLTAIA NVAEALKDKG IPLIADGGIR FSGDVAKALV SGASAVMLGS
MFAGTEESPG EVEYYQGRAY KSYRGMGSLG AMSQKQGSSD RYFQSSNAAD KLVPEGIEGR
VAYKGPLAPI IHQLVGGIRS SMGYTGCKDI KEFNTKPSFV RVSGAGMAES HVHNVQIVKE
APNYRV