Gene Tcr_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1609 
Symbol 
ID3760869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1761662 
End bp1763554 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content42% 
IMG OID637786346 
Productheat shock protein 90 
Protein accessionYP_391875 
Protein GI78485950 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATA CGGAAACTCA TGCGTTTCAA ACTGAAGTGA ACCAATTGTT AAAACTGATG 
ATTCATGCCC TTTACAGTAA TAAAGAAATC TTTTTAAGAG AGTTGGTTTC AAATGCTTCT
GATGCATTGG ATAAACTGCG TTTTGAATCG GTTTCAAACG ATGCCTTATC GGAAGGGGAG
TCAGAACTTG CAATTCAAGT TGGGTTTGAC AAAGAAGCTA GAACCGTATC GATTATTGAT
AACGGGATTG GGATGACGCG TGACGAGGTT ATTGCCAATA TCGGGACAAT CGCAAACTCC
GGAACGAAAA AATTCCTTGA AAATATGACC GGTGATCAAG CGAAAGACAG CCATTTGATT
GGGCAGTTCG GGGTTGGTTT CTATGCGTCT TTCATTGTTG CGGATAAAGT GACTTTGACC
ACTCGTAAAG CAGGAGATGA TAAATCAGAA GGAACCCGTT GGGAATCGGC AGGTGAAGGT
GAGTACACAC TTGAAACCGT TGAAAAAGAA ACCAAAGGGA CTGAAATCAC GCTTCATCTG
AAAGAAGACA TGGATGAGTT CTTAGATGAC TTCAGATTAA AGAGCATCAT CACGACGTAT
TCTGACCACA TCAATTTCCC AATTAAAATG TGGCAAGTAA AACTGGATGA AGAAGGTAAG
GAAACCGAAG AGAAGTCATT AGAGCAGGTT AACAAAGCGA CAGCGATTTG GACGCAGCCT
AAATCTGAGT TATCAGATGA AGATTACAAT AACTTCTATC AAACCATTTC GCATGATTAT
GAAAACCCTT TAGCGCATAT TCATAATAAA GTGGAAGGGA CACTGGAATA CACGTCGTTA
CTTTATCTCC CTAAGAAAGC ACCGTTTGAC TTGTATGATA GAGATCGTCG TTACGGCCTG
AAACTGTATG TTAAACGTGT CTTTATCATG GATGATGCCG AACACCTGAT GCCGACGTAC
TTACGTTTTG TTCGCGGGGT AATTGATTCG AATGATTTAC CGCTAAACGT TTCGCGTGAG
ATTTTACAAA GTAACCGTGT GGTGGATAAA ATCCGTTCGG CTTCGGTTAA ACGTGTGCTT
GACCAGTTGG CGAAAATGGC AAAAGCTGAA GATCAATCTG ATTATGAAAC GTTCTGGGAT
CAGTTTGGTA ATGTTATGAA AGAAGGGGTT ATTGAAGACT TTGCGAATAA AGATAAAATC
GCCAAACTGC TTCGTTTTTC TTCAACTCAT GAATCCTCTG GCCCGACTCA ACGTGTGTCT
TTACAAGATT ATATTGATCG TATGGGAGAA GGCCAAGAAG CCATTTACTA CATTACGGCG
GATACGTATG CTGCGGCTAC AGGTAGCCCA CACTTAGAAA TGTTCCGTAA GAAGGGCATT
GAAGTCTTGT TGTTGACCGA TCGTATTGAT GAGTGGTTAG TCTCGCACCT GACAGAATTT
GAAGGCAAGC AGCTGAAATC CGTTACTTCT GCCGACTTAA AAGAGTTCGA TGAAGAGGCA
GACAAAGAAT TATCTGAAGA AGATAAGAAA GCGCGTGAAG CCTTAACGGA GAAAGTGAAA
AAAGCGATTG AAGATCAAGT GTCGGATGTC AAAATCACGC ATCGTTTAAC CGATTCTCCT
GCATGCGTGG TTTCTGCAGA AGGCGACATC TCAGCTCATA TGGCGAGAAT GATGGAGCAA
ATGGGACAAG CGATGCCAAA GCAAAAACCG GTGTTGGAAC TGAACCCGGA TCACGCATTG
GTGAAAAAAC TGGACAGCCT AGAAGATGAA CCGAAAGTCA AAGAGTGGTC TTTGTTCTTA
TTGGAGCAAG CGCAATTGGC GGAAGGGGAT CAACTGGAAA AACCAGCGGA CTTCATTAAA
CGAATGAATG CGTTGTTAAG TGAAGTGATT TAA
 
Protein sequence
MSHTETHAFQ TEVNQLLKLM IHALYSNKEI FLRELVSNAS DALDKLRFES VSNDALSEGE 
SELAIQVGFD KEARTVSIID NGIGMTRDEV IANIGTIANS GTKKFLENMT GDQAKDSHLI
GQFGVGFYAS FIVADKVTLT TRKAGDDKSE GTRWESAGEG EYTLETVEKE TKGTEITLHL
KEDMDEFLDD FRLKSIITTY SDHINFPIKM WQVKLDEEGK ETEEKSLEQV NKATAIWTQP
KSELSDEDYN NFYQTISHDY ENPLAHIHNK VEGTLEYTSL LYLPKKAPFD LYDRDRRYGL
KLYVKRVFIM DDAEHLMPTY LRFVRGVIDS NDLPLNVSRE ILQSNRVVDK IRSASVKRVL
DQLAKMAKAE DQSDYETFWD QFGNVMKEGV IEDFANKDKI AKLLRFSSTH ESSGPTQRVS
LQDYIDRMGE GQEAIYYITA DTYAAATGSP HLEMFRKKGI EVLLLTDRID EWLVSHLTEF
EGKQLKSVTS ADLKEFDEEA DKELSEEDKK AREALTEKVK KAIEDQVSDV KITHRLTDSP
ACVVSAEGDI SAHMARMMEQ MGQAMPKQKP VLELNPDHAL VKKLDSLEDE PKVKEWSLFL
LEQAQLAEGD QLEKPADFIK RMNALLSEVI