| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1581 |
|---|
| Symbol | |
|---|
| ID | 3760840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1729645 |
|---|
| End bp | 1731021 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637786317 |
|---|
| Product | UDP-N-acetylmuramate |
|---|
| Protein accession | YP_391847 |
|---|
| Protein GI | 78485922 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATTC ATATCTTAGG CATTGCTGGT ACATTCATGG GTGGGATTGC CCAGCTTGCC
AAATCAATGG GCGTGAATGT CAGCGGCTCT GATACGGCCA TCTATCCTCC CATGAGCACC
CAACTTGAAC AAGCCGGGAT TCCTGTTTCC ACTTATGACG AAGCGTTTCT TTCTCAGACG
CCTGACGTCG TTGTGATTGG CAATGCCTTA AGCCGTGGTC ATGCGGCGGT TGAAGCAACA
TTGAATGCAC AACAGCTTTA TACCTCTGGA CCTCAGTGGC TGGCAGAAAA TATTTTAAAA
GATCGCTGGG TGGTCGCTGT TGCCGGCACG CATGGTAAAA CAACAACGGC TTCGATGGTG
GCTTGGATTT TGGAACACGC TGGTTTGCAA CCCGGTTTTT TGATTGGGGG CGTGCCGGAA
AATTTTGGGG TTTCCGCTCG ACTGGGGGCA TCGCCATTTT TTGTTGTCGA AGCCGATGAA
TACGATACGG CTTTTTTTGA TAAACGATCT AAGTTTGTCC ATTATCACCC TCGCACGTGT
GTGTTGAACA ATTTAGAGTT TGATCATGCC GACATTTTTG ATGACTTGGC AGCCATTCAA
AAACAGTTTC ACCATTTGGT GCGAACCGTG CCTGGCAATG GTTTAATTAT TCAACCTTCC
GATGAAACGA ATATTGATGA AGTCATTCAG CAAGGCTGTT GGACGCCACT TGAAACTCAG
GGCAGCCAGT CGACGCAGGC CGATTGGGCC TATCAACTGT TATCGGATGA TGGTACCGCC
TATGAAGTCT ATTATAAGGG GCAGCTCAGA GGCGAAGTCC ATTGGCAAAT GACCGGGCTT
CATAACGTCC GTAATGGGGT GAGTGCAATT GCTGCCGCGC AGCATTGTGG GGTTCCGGTG
GAAGAAGCGA TTCAAGGGCT GTGTGCTTTT GAAGGCGTGC GCCGAAGAAT GACTCAAATT
GGCACGGTAA ATGGCATTGT GGTTTATGAT GATTTTGCAC ATCATCCAAC GGCAATTGAA
ATGACTTTGT CGGGTATGAA ATCACAATTG AAAGCACGAC CGACGTCTGG ACGCTTGATT
GCGGTGTTTG AGCCTCGCTC CAATACTATG CGCATGGGGG TTCATCAAAA CAGTTTACCG
GCGGCATTTG ATCAGGCCGA TGCCGTTTAT GCCTTTATTG ATCCGGACTG GAATTGGTCA
ATGCCTAAGG ACCTTTTTAA AGTTCCAGTC AAGGTCGCCG ATACCTATAA TGATTTGCTC
GATCGATTGG TGGATGAGCT TTTGCCGGAA GACACGGTCG TGATTATGAG TAATGGTAGT
TTTGGCGGTA TACACCAACG GTTATTAAAC GCGTTACAAC AAAAATTTTC GGTTTAA
|
|---|
| Protein sequence | MKIHILGIAG TFMGGIAQLA KSMGVNVSGS DTAIYPPMST QLEQAGIPVS TYDEAFLSQT
PDVVVIGNAL SRGHAAVEAT LNAQQLYTSG PQWLAENILK DRWVVAVAGT HGKTTTASMV
AWILEHAGLQ PGFLIGGVPE NFGVSARLGA SPFFVVEADE YDTAFFDKRS KFVHYHPRTC
VLNNLEFDHA DIFDDLAAIQ KQFHHLVRTV PGNGLIIQPS DETNIDEVIQ QGCWTPLETQ
GSQSTQADWA YQLLSDDGTA YEVYYKGQLR GEVHWQMTGL HNVRNGVSAI AAAQHCGVPV
EEAIQGLCAF EGVRRRMTQI GTVNGIVVYD DFAHHPTAIE MTLSGMKSQL KARPTSGRLI
AVFEPRSNTM RMGVHQNSLP AAFDQADAVY AFIDPDWNWS MPKDLFKVPV KVADTYNDLL
DRLVDELLPE DTVVIMSNGS FGGIHQRLLN ALQQKFSV
|
|---|
| |