Gene Tcr_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1574 
Symbol 
ID3760833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1723267 
End bp1723974 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID637786310 
Productcopper resistance B precursor 
Protein accessionYP_391840 
Protein GI78485915 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3667] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAT CTATTAAGAC GTTACCAATA GTATTACTAC TTTTTACATC AACTTACAGC 
CATTCCTCTT TTGCGCTAAG CGAATACGAT CCTTTGTTGG CGGGCGTAAG AGTCAATCAG
CTTGAAAAAT CCACTCAACA AGGTGAGCCG TTATCCTGGG ATGCATCGGC CTGGGCAGGA
AAAAACTGGC ATAAGGTTTA CCTAACCTCG GAAGGGGAAT CATCAAATGG TTCGACCGAA
TCCGAAAATC AGTTGTTATA CAGCACCCCT GTTGAAAGGT TTTGGGATTT GCAGGCGGGG
ATAGGCTATG ACGAAACCCC CGAAAACAGC CAAACTTGGG GAATAGTTGG TTTTCAAGGC
TTAGCACCTT ACTTTTTTGA AATAAATTCA AGATTACTTG TTAATGATAA GAATGCAGGG
TTTCGCTTGG ATGCAGAATA TGAAGCGCTA TTCACGCAAA GATTGATTTT AACTCCTAGT
CTTAAATTGA ATGCCTATAC ATCAGATGAT AAAAAAATGG GGATTGGATC AGGCTTATCA
TCTACAGAAC TTGGGATGCG GCTACGTTAT GAATTTAGTC GAAAGTTTGC ACCCTATATT
GGTGTGAAAT GGAATCAGGC TTATGCAACA ACGGCTGATT ATAAAAAAGA GGAAGGCGCT
AAAACATCAG AGACCAGCCT TGTGGCAGGA CTGCGTTTTT GGTTTTAA
 
Protein sequence
MNTSIKTLPI VLLLFTSTYS HSSFALSEYD PLLAGVRVNQ LEKSTQQGEP LSWDASAWAG 
KNWHKVYLTS EGESSNGSTE SENQLLYSTP VERFWDLQAG IGYDETPENS QTWGIVGFQG
LAPYFFEINS RLLVNDKNAG FRLDAEYEAL FTQRLILTPS LKLNAYTSDD KKMGIGSGLS
STELGMRLRY EFSRKFAPYI GVKWNQAYAT TADYKKEEGA KTSETSLVAG LRFWF