Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1568 |
Symbol | |
ID | 3760827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1717354 |
End bp | 1718016 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786304 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_391834 |
Protein GI | 78485909 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000202684 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAG ATGAATTAAA ACAACAAGTT GCTATAGCAG CAATCGAATA CGTCGTTCCA GACACCTTTA TTGGTGTAGG AACAGGCTCT ACAGCAAACT TTTTCATTGA TGAGCTTGCT AAGATCAAAG GCAAAATCAA AGGCGCTGTT GCCAGTTCCG AAGCCACGGC AGAACGTTTA AAAGATCATG GCATCCCAGT AATGGAATTG AATTCTGTCG ATGAGTTATC TGTTTATATT GATGGCGCTG ACGAAGCGGA CCCTAAACTC AACCTAATTA AAGGTGGTGG CGGTGCTTTA ACACGTGAAA AAATCGTTTT AGCCGTTGCG AAACAGTTTG TATGTATTGC CGATGACAGT AAGAAAGTGG CTGTACTAGG TAAATTCCCA CTTCCAATTG AAGTGATTCC GATGGCTCGC AGTTACGTCG CTCGTGAAGT TGTTAAACGC TTCGGTGGCG AGCCTGTCTT GCGTGAAGGG TTTACAACAG ACAATGGTAA TGTCATTTTA GACATCCACG GTTTGGAAAT CACCGATCCA GTCGCGATGG AAACAGAGCT GAACGGTATT GTTGGCGTGG TAACAAATGG ATTGTTTGCA GCACGTAACG CAGACATCTT CCTATGTGGT ACCGCCAACG GTGTTGAAAC CATCAAGGCG TAA
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Protein sequence | MTQDELKQQV AIAAIEYVVP DTFIGVGTGS TANFFIDELA KIKGKIKGAV ASSEATAERL KDHGIPVMEL NSVDELSVYI DGADEADPKL NLIKGGGGAL TREKIVLAVA KQFVCIADDS KKVAVLGKFP LPIEVIPMAR SYVAREVVKR FGGEPVLREG FTTDNGNVIL DIHGLEITDP VAMETELNGI VGVVTNGLFA ARNADIFLCG TANGVETIKA
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