Gene Tcr_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1568 
Symbol 
ID3760827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1717354 
End bp1718016 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID637786304 
Productribose-5-phosphate isomerase A 
Protein accessionYP_391834 
Protein GI78485909 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000202684 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAG ATGAATTAAA ACAACAAGTT GCTATAGCAG CAATCGAATA CGTCGTTCCA 
GACACCTTTA TTGGTGTAGG AACAGGCTCT ACAGCAAACT TTTTCATTGA TGAGCTTGCT
AAGATCAAAG GCAAAATCAA AGGCGCTGTT GCCAGTTCCG AAGCCACGGC AGAACGTTTA
AAAGATCATG GCATCCCAGT AATGGAATTG AATTCTGTCG ATGAGTTATC TGTTTATATT
GATGGCGCTG ACGAAGCGGA CCCTAAACTC AACCTAATTA AAGGTGGTGG CGGTGCTTTA
ACACGTGAAA AAATCGTTTT AGCCGTTGCG AAACAGTTTG TATGTATTGC CGATGACAGT
AAGAAAGTGG CTGTACTAGG TAAATTCCCA CTTCCAATTG AAGTGATTCC GATGGCTCGC
AGTTACGTCG CTCGTGAAGT TGTTAAACGC TTCGGTGGCG AGCCTGTCTT GCGTGAAGGG
TTTACAACAG ACAATGGTAA TGTCATTTTA GACATCCACG GTTTGGAAAT CACCGATCCA
GTCGCGATGG AAACAGAGCT GAACGGTATT GTTGGCGTGG TAACAAATGG ATTGTTTGCA
GCACGTAACG CAGACATCTT CCTATGTGGT ACCGCCAACG GTGTTGAAAC CATCAAGGCG
TAA
 
Protein sequence
MTQDELKQQV AIAAIEYVVP DTFIGVGTGS TANFFIDELA KIKGKIKGAV ASSEATAERL 
KDHGIPVMEL NSVDELSVYI DGADEADPKL NLIKGGGGAL TREKIVLAVA KQFVCIADDS
KKVAVLGKFP LPIEVIPMAR SYVAREVVKR FGGEPVLREG FTTDNGNVIL DIHGLEITDP
VAMETELNGI VGVVTNGLFA ARNADIFLCG TANGVETIKA