Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1560 |
Symbol | |
ID | 3760819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1709220 |
End bp | 1709804 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637786296 |
Product | YgfB and YecA |
Protein accession | YP_391826 |
Protein GI | 78485901 |
COG category | [S] Function unknown |
COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.272578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCGT CTGGAATGGA ATTTGATCAA ATAAATGACG CTTTACAAGC GTACCCTGAA TTGGAATCAC CTTCGTTTTT GCAAGGGATG CTGGTTGGGC TGATGTGTGG TGATACGAAT TTAAAAGAAA GCGCTTGGAT TAAAAAAATT CTAGAAGAAG CGAATGTGAA GTCTGTGAAA GAAAGTTTTC TTATCGCGTT GCATGAACTG TATTTAGAAA CGGATAAAAC TCTGAATGGA TCAGGATTTG AATTGATTCT TTGTTTGCCG GATGAAAATG AAGCTCTGCC TGCACGAGCA GCTATGTTGG GGCAATGGTG TGAAGGGTTT TTATATGGCA TGGGCTTAGC GGGCCAGTCA GAACAAAAAT TAACGGGTGA AGTGGCCGAA TTATTCCGTG ATTTTGGGGA CATTGCCCGT ATTGAAGTGG ATGGGTTAGA AGACGCCAGT GACCAGGAAG AGTCAGACTT CATGCAGTTG GTTGAGTTTG TCAAAATTGG TGTCTTAACC ATTAATGAAG AGCTGAATCC GGTGGAAGGG TCTCCTATTA TGATGCAAGA CGCACCAACG GATACCTTGC ATTAA
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Protein sequence | MDSSGMEFDQ INDALQAYPE LESPSFLQGM LVGLMCGDTN LKESAWIKKI LEEANVKSVK ESFLIALHEL YLETDKTLNG SGFELILCLP DENEALPARA AMLGQWCEGF LYGMGLAGQS EQKLTGEVAE LFRDFGDIAR IEVDGLEDAS DQEESDFMQL VEFVKIGVLT INEELNPVEG SPIMMQDAPT DTLH
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