Gene Tcr_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1553 
Symbol 
ID3760812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1701310 
End bp1701792 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content43% 
IMG OID637786289 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_391819 
Protein GI78485894 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000130107 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA CACCCTCACT GCAAATCGGA CAAAAAATCC CTTCATTCTC ACTTGAAGCC 
ACAAACGGGC ACACCGTTTC AGAAAAAGAC CTCACGGGTC ACTACACGGT CGTTTACTTC
TACCCAAAAG ATGACACCCC CGGTTGTACA ACCGAAGGCC AAGACTTCAC ACAAGCCTAC
CCAGATTTCA AAACTGAGAA CACCGTTATT TACGGCGTCT CAAAAGATTC CATCAAAAAG
CACGAAAACT TCAAAAGCAA ATTCGACTTC CCATTTGAAT TGATTTCAGA CCCCGATGAA
ACATTGTGCA AACTATTCGA CGTGATCAAA CTCAAAAAGA ACTATGGTCG GGAATACATG
GGAATTGAAC GCAGCACTTT TCTAATCAAC CCAGAAGGAG AACTGATTCA AGAATGGCGT
AAAGTGAAAG TTCCCGACCA CGTAACCGAG GTTTTGGAAG CCGTAAAAAA TGTAAAGAAC
TAA
 
Protein sequence
MTTTPSLQIG QKIPSFSLEA TNGHTVSEKD LTGHYTVVYF YPKDDTPGCT TEGQDFTQAY 
PDFKTENTVI YGVSKDSIKK HENFKSKFDF PFELISDPDE TLCKLFDVIK LKKNYGREYM
GIERSTFLIN PEGELIQEWR KVKVPDHVTE VLEAVKNVKN