Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1552 |
Symbol | |
ID | 3760811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1700256 |
End bp | 1701116 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786288 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_391818 |
Protein GI | 78485893 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000224782 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGGCCT TGGTCACACC CATGATGGGG GACGAATCTG TGGATTTTGA TGCGCTTGAA AGATTGATCG AGTTTCATAT CAAATCCAAG ACTAGAGCCA TCGTTGCGAT GGGAACAACA GGTGAATCAG CTACGTTGGA TTTCCAAGAG CATCGTGATG TGGTCCGTTT TGTGGTGGAA AAAGCAGCGG GTCGTATTCC GGTTATAGCT GGAACGGGCG CAAACTCAAC CACGGAAGCG ATTGAGTTGA CGCAATATGC AAAAGAAGTG GGCGCAGATG CCTGCTTGTT AGTGACGCCT TACTACAACA AACCGACGCA AGAAGGGTTG TATCTGCACT ATAAGAAGAT TGCTCAAACG GTTGATATCC CTCAGATTCT TTATAATGTT CCAGGTCGAA CGGCTTGTGA TTTATTGCCT GAAACCATTG GACGCTTATC AACCATTAAC AATATCATCG GCGTAAAAGA AGCCACAGGA GACGTCAGTC GTGTTAGCCA AATTAAAGAA TTGGTTGATG ATGATTTCGA TTTGTACACC GGTGATGATG CCACAGCCGT CGACTTCATT TTAGAAGGTG GGCACGGTGG TATTTCGGTC ACAGCGAATG TGATGCCGGC GTTAGTGTCA GAAGTGTATG ACGAAGCCTT GGCGGGTCAT GCCGAAAAAG CAAGAATGAT GGATGCGCCT TTAACCGAAT TACATAAAAA CTTATTTGTT GAAGCCAATC CGATTCCTGT GAAATGGGCC ATGGCAGAAA TGGGGTTGAT GGGCGGAGCG ATACGTTTGC CGTTAACACC CTTGTCTGAA AAATATCATG CATTGGTGCG CCAAGCTTTA CAAACTGCGG GAGCGTTATA A
|
Protein sequence | MVALVTPMMG DESVDFDALE RLIEFHIKSK TRAIVAMGTT GESATLDFQE HRDVVRFVVE KAAGRIPVIA GTGANSTTEA IELTQYAKEV GADACLLVTP YYNKPTQEGL YLHYKKIAQT VDIPQILYNV PGRTACDLLP ETIGRLSTIN NIIGVKEATG DVSRVSQIKE LVDDDFDLYT GDDATAVDFI LEGGHGGISV TANVMPALVS EVYDEALAGH AEKARMMDAP LTELHKNLFV EANPIPVKWA MAEMGLMGGA IRLPLTPLSE KYHALVRQAL QTAGAL
|
| |