| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1542 |
|---|
| Symbol | |
|---|
| ID | 3762272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1681106 |
|---|
| End bp | 1682293 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637786278 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_391808 |
|---|
| Protein GI | 78485883 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGG ATTTTAATAA CGCCATTTCC CGTTTGGGAA CGGATTCGGA AAAGTATGAT
TTACGTCAAA AGTTATTTGG CACAGATGAT GTATTGCCCA TGTGGGTGGC GGATCAGGAT
TTGCCAACAC CTCCCTTCAT TTTAGAAGTG TTGAAAAAAC GTCTGGAACA TCCCATTCTA
GGATATAACC ACATGCCCGA TTCGCTGTAT CAATCGATTG TGAATTGGCA AGCTCAGTAT
CATTATGAGG TCGAACCATC TGATATTGTG TTTACGCACA ATGTTGCGAA TGGTTTTTTT
ATGGCGGTTT CGGCATTCAC AGCTCCTGGC GAAGCCGTGT TGGTACAACC GCCGGTTTAT
CCGCCTTTTC TGACGGCTTC GACGATTGAA AATCGCCAGT GTGTCGAAGC GCCGTTAATA
CTCAAAAATC ATCGTTACGA AATTGATTTT GAGGCGTTTG AGCAAAAAAT TATTGACCAT
CAGGTGAGGT TGTTTTTATT GTGTAACCCT CAGAATCCTT CTGGCCGGGT TTGGTTAAAA
TCGGAGCTGG AAAAACTCGC AGCGATTTGT TTAAAACATG AAGTGGTTGT GGTGTCGGAT
GAAATTCATG CTGATATGAC GTATCCGGAG CATCAACATA TTCCGATGGC TTCTTTATCA
GAAGAGGTTA AAAACAATAC CGTTACGTTA AACTCTCCTG GTAAAACCTT TAATTTGGGT
GGTTTGCAGA TTGGCTATGC CATTATTGCC AATCCAGAGT TAAAAGCCGC TTATCTGAAA
ATTTGTCAAG CCAATGCCAT TCAAGATTTA AATTTGTTTG GTTATCTAGC AACACAAGCG
GCTTATTCGG AGCAAGGCTG TCTTTATCGG GATCAGTTAT TACAGCATTT TTTAGACAAT
ATTGAACGTG TGGAAGACTT TTTTCAAACG TTTTTACCTC AAGTGAACGT GATGGTTCCC
GAAGCCTCTT ATTTGATTTG GTTGGACTTT TCGGCGCTGT TTTCATCTCA AGCCGATTTG
AAGGCTTGGT TGATTCAATA CGCCAAGTTG GGATTGAATG ACGGTGAAAG CTTTGGCAAA
GCAGGCAAAG GGTTTATGCG GATGAATCTA GCGGTTTCTG AAGAAACGTT GACCCAGGCT
CTAACCCAAC TTAAGCGCGC GATTGCATCG AATACGTTGC CAAAATAG
|
|---|
| Protein sequence | MKLDFNNAIS RLGTDSEKYD LRQKLFGTDD VLPMWVADQD LPTPPFILEV LKKRLEHPIL
GYNHMPDSLY QSIVNWQAQY HYEVEPSDIV FTHNVANGFF MAVSAFTAPG EAVLVQPPVY
PPFLTASTIE NRQCVEAPLI LKNHRYEIDF EAFEQKIIDH QVRLFLLCNP QNPSGRVWLK
SELEKLAAIC LKHEVVVVSD EIHADMTYPE HQHIPMASLS EEVKNNTVTL NSPGKTFNLG
GLQIGYAIIA NPELKAAYLK ICQANAIQDL NLFGYLATQA AYSEQGCLYR DQLLQHFLDN
IERVEDFFQT FLPQVNVMVP EASYLIWLDF SALFSSQADL KAWLIQYAKL GLNDGESFGK
AGKGFMRMNL AVSEETLTQA LTQLKRAIAS NTLPK
|
|---|
| |