Gene Tcr_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1527 
Symbol 
ID3762257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1664093 
End bp1664605 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content42% 
IMG OID637786263 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_391793 
Protein GI78485868 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0275455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCT GGCAAGATGT GTATATTGGA TTGGGAAGTA ATCTTTCTAA TCCGGAAGAG 
CAAGTATTAA ACGCATTAGA TTCCTTAAAA ACGTTGCCTG AAAGTCAATG GGTGACGCAT 
TCCAAATTAT ATTTTTCTCG GCCTCAAGGC CCACAGGATC AACCTGATTT TGTGAATGCG 
GTTGCTTTGT TAAAAACCCA GCTTTCTCCT GTCGCTTTAC TTGATTGTCT GCAAGCACTT 
GAAGCCGCAC AAGGCAAAGT GAAACAACGT CATTGGGGCG AGCGATTAAT TGATTTGGAT 
ATTGTGTTAT ATGGTAATGA AACACTGAAC ACAGAGCGTT TAACGATCCC CCATCCCTTT 
ATGGCTGAAA GAGATTTTGT ACTCTTACCT TTGGCTGAAA TATCACCCGG GTTAATCTTG 
CCCAATGGGT CTAAGATTAA GGATTTAATC GCAGAACTGC CGGAAGGGTT TATAATAAAC 
GACAGAACAG CAGAGAAGAA TCGAGAGAAA TGA
 
Protein sequence
MAAWQDVYIG LGSNLSNPEE QVLNALDSLK TLPESQWVTH SKLYFSRPQG PQDQPDFVNA 
VALLKTQLSP VALLDCLQAL EAAQGKVKQR HWGERLIDLD IVLYGNETLN TERLTIPHPF 
MAERDFVLLP LAEISPGLIL PNGSKIKDLI AELPEGFIIN DRTAEKNREK