| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1486 |
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| Symbol | |
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| ID | 3761608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1606542 |
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| End bp | 1607105 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786217 |
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| Product | OmpA/MotB |
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| Protein accession | YP_391752 |
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| Protein GI | 78485827 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00178508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACAT CAGGTCTTAA GCAGCTTTTT CTAGTTGGTT TTTTAGGATT AACATTGGTT
GGTTGTAGCT CGACGCCAAC GACTGAAGAA GGTGATACTG GTTCAACGAC TGAGCAAACA
TCTGCCTCAG CAGAAACAGA AACATCATCG GCAACGGATT CAAATGCTGG CTCTGGTGCT
GACATGGCTG CAGCAACAAA TGCGGCAGGC CAAACAGCAG AAGACCTGTA TGCGGCACTT
CAAGGTAAGG TTGTCAATTT TGAATTTGAC CGCTCTGAAG TTCAATCACA GTTTTATGAT
GTGATTAAAA TGAATGCAGA TTATATGGCA TTAAATGATT CAGCAATGGT TACGGTTAAG
GGGTATTGTG ATGAGCGTGG TACACGTGAA TACAACCTGG CACTTGGTGA GCGTCGTGCG
AATGCCGTTA AGAATGCCTT GGTAGCAGAA GGCGTCAGTC CAAGCCGTAT TAATGTCATC
AGCTTTGGTG AAGAAAACCC TGTTGATCCA GCGCATAATG AAGCAGCATG GGCTAAGAAC
CGTCGAGCTG AATTTTCATA CTAA
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| Protein sequence | MSTSGLKQLF LVGFLGLTLV GCSSTPTTEE GDTGSTTEQT SASAETETSS ATDSNAGSGA
DMAAATNAAG QTAEDLYAAL QGKVVNFEFD RSEVQSQFYD VIKMNADYMA LNDSAMVTVK
GYCDERGTRE YNLALGERRA NAVKNALVAE GVSPSRINVI SFGEENPVDP AHNEAAWAKN
RRAEFSY
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