Gene Tcr_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1469 
Symbol 
ID3761949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1588873 
End bp1589664 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content44% 
IMG OID637786200 
Producthypothetical protein 
Protein accessionYP_391735 
Protein GI78485810 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAG CACTCTATGT CGCAAAAACA GGTTTAGAAG CACAAGATTT TAGATTGGCC 
ACTATTTCGA ATAACTTGGC CAATGCCAAT ACCTATGCTT ATAAGACAGG CCGCGCCGAA
TTTAATGATT TGATGTATCA GAACGTTCGT CAACCCGGTG CGCAGGCTAC GCAAAATGAA
GAAAATACTT TTCCGTCTGG CCTTCAGCTA GGGACAGGGG TGAAAGCCAT TGGGGTTCAG
AAAATCCATA CCCAAGGGAA TGCCATGGTT ACCGATAATC AGTTGGACGT GATGATTGAA
GGGAAAGGGT TTTTCCAAGC ATTGGATCAA GACGGCAACA TCATGTATAC CCGTGATGGG
TCGTTTGAAG TTAACCAGAA TGGTGATCTA GTGACGTCAT CAGGGTACTT GGTTGAACCT
AATATCAATA TTCCATTGAA TACGACGGAA GTCTTTATCT CTAGTGATGG TGTTGTGTCT
GCGAAAGAGC CAGGCAACCC TCAACCGATC GCGGTTGGTC AGCTTGAATT AGCGACGTTT
ATCAATCCGG CCGGGTTGGA AGCAACAGGG AAGAATTTTT ATATTGAAAC CTTAGCCAGT
GGTGCCCCCA ATGTTAAAAA CCCCGAAATT GAAGAAGCGG GGAGTTTGTT ACAAGGGGCC
TTAGAGTCTT CCAACGTGAA TACGGTTGAA GAGTTAATCG GCATGATCGA AGCTCAGAGA
ACGTATGAGA TGAACTCAAA AGCAATCAGT GCCGCGGACG GTATGATGCA GTATTTGAAT
AATAATGTTT AA
 
Protein sequence
MNRALYVAKT GLEAQDFRLA TISNNLANAN TYAYKTGRAE FNDLMYQNVR QPGAQATQNE 
ENTFPSGLQL GTGVKAIGVQ KIHTQGNAMV TDNQLDVMIE GKGFFQALDQ DGNIMYTRDG
SFEVNQNGDL VTSSGYLVEP NINIPLNTTE VFISSDGVVS AKEPGNPQPI AVGQLELATF
INPAGLEATG KNFYIETLAS GAPNVKNPEI EEAGSLLQGA LESSNVNTVE ELIGMIEAQR
TYEMNSKAIS AADGMMQYLN NNV