Gene Tcr_1465 details

Gene Information

• Locus tag: Tcr_1465
• ID: 3761945
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: -
• Start bp: 1584274
• End bp: 1586166
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637786196
• Product: hypothetical protein
• Protein accession: YP_391731
• Protein GI: 78485806
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATA TGTTAAATAT TGGTACCGCA GCGACGAATA CGTTTAGACG CGCGATTGAG 
GTAACCAGTC ACAATGTTGC CAATGTCGGA ACCGAAGGGT ATAGCCGACA AAGAGCCGAT 
ATAACCAGCA GCTCCGCAAG TAATGCTGGC TATGGGTTTT TAGGAGCTGG CTCACGAGTC 
AGTTCAATTG ATCGAGTTTA TGCGGACTAT ATTCAAACGC AACTGGTCGA TGCGTACAGT 
CTAAAGAGTC GATATGACGA ACAGCTTAGC TTGTCCAAAC AAGTTGAAGG AATTGTTGCC 
AGTAACGATA AAGGTGTTCA AACCTTTATG CAAAGTCTAT TTGATTCTTT TCAGGATTTA 
TCCAATAACC CAACGTCTTC AACAAGCCGA GATCAGGTTG TTAGTCAAGC CAAGAATATG 
GAAACCATGT TGTTAAACAT GAGCACCGTT TTAGGGGATA CCCAAGAGCA AGTCAATGGT 
CAGATTAAAA ACATGACCGA TGAGATTAAT AAAAATTTAA CCACCATTCA GGCCATTAAC 
AATCAGGTGG CTAACAGTAT TTCAAATGGT GGACAGCCCC CAAATGACTT ATTGGATCAA 
CGTGAGCAGG CCATTAAAGA ATTGGGTCAG TATATGGATA TCAAAACATT TCGACAAGAG 
GATGGTCGAA TTGATATTCA TACCGGAAAT GGTCGCTATC CTTTAATCAG TGACAACACC 
ATAACGAAAC TGGATGCAGA TCTGACTGAT TATAAGAATG AAAACCGAGT GGAAGTGTAT 
ATGCAGCTCG GTGGTCAAAA AGTTCAAGTT TCCGATAATA TTAAAGGCGG ACAGCTGGGT 
GGAGTATTAG ATTTCCGTAA TAATATGCTG GATCGTTCAA TGAATGAACT AGGGTTAGCG 
TTGAATGGTT TGGTTGCGTC TACCAATTGG CAGCACTATC AAGGGTATGA TCAAAACGGT 
AATCCTGGGC AAGATTTTTT TAAGCCGTTA TCGACCAATG CGATTCAAAG CGCTAAAAAT 
ACCGGGCCTG AAGATGGCAC GAATATACAG GTAAGTTTTA ACCCTGTATA TGATCCAAGT 
GCCCCAGTTC AAGGAACCAA CCCACCTTAT GATCCGGCCG CAGTTCCACC TGCGGATAAT 
GCTCAACCAC CAACTTATGG TGATAAACAA AATTATTTAA ATCAAGCGAT GAGCGCGATC 
GGTGAATTCG AACCACGTGA GTATAAGTTG CAGTTTTCAA CGGCCAGTAA TGGATTTGAA 
ATTAAAGATA ATAAAACGGG CGATCCTATT TTAGACGCGG CGGGTAATCC GGTTTTGATT 
ACGCTCGGTG CACCTGATAA TGGGTTTGAA GATGTTGAGG GGCTTCGTTT TGATGTCACC 
AATGTAGCTG CCGCGCCAGC CGATGGCGAT ACCTTTGTTG TGAAGCCGCA TCAAGCGATG 
TTAGAAGACT TTGCAACGAC GATAAGCAGT GGTGAACAAA TTGCAGCTAG AGGACAATCC 
CCTGTGGATA CGGGCGTTGC AGGGCTCGCG GATGAAGCGC CTTCACCTGC TTCCGTTGGT 
GATAATGTTA ATATTGCGAA TATGGCCAGC CTTCAATCTA AAAAAGTGCT TTATTCAGAT 
GCGACCGGTA ATGCGTCAGA AACCTTACTC GGTGGGTTTT CTAAGATGGC GACTAATGTC 
GGGATGTATG TGCATGGGAC CGAAATTCAA TTGACGTCAC AAGAAAATGT TTTTGATCAA 
ATCAACGCCA GACGAGAATC TTACTCAGGG GTTAACTTAG ATGAAGAAGC CGCTAATTTA 
CTCCGGTTTC AGCAGGCTTA CCAAGCATCT GCTCAAATCA TTCAAACATC GCAGTCACTG 
TTTCAGTCAT TACTTGGCGC AGTTCGCTTA TAA 

 

Protein sequence

MADMLNIGTA ATNTFRRAIE VTSHNVANVG TEGYSRQRAD ITSSSASNAG YGFLGAGSRV 
SSIDRVYADY IQTQLVDAYS LKSRYDEQLS LSKQVEGIVA SNDKGVQTFM QSLFDSFQDL 
SNNPTSSTSR DQVVSQAKNM ETMLLNMSTV LGDTQEQVNG QIKNMTDEIN KNLTTIQAIN 
NQVANSISNG GQPPNDLLDQ REQAIKELGQ YMDIKTFRQE DGRIDIHTGN GRYPLISDNT 
ITKLDADLTD YKNENRVEVY MQLGGQKVQV SDNIKGGQLG GVLDFRNNML DRSMNELGLA 
LNGLVASTNW QHYQGYDQNG NPGQDFFKPL STNAIQSAKN TGPEDGTNIQ VSFNPVYDPS 
APVQGTNPPY DPAAVPPADN AQPPTYGDKQ NYLNQAMSAI GEFEPREYKL QFSTASNGFE 
IKDNKTGDPI LDAAGNPVLI TLGAPDNGFE DVEGLRFDVT NVAAAPADGD TFVVKPHQAM 
LEDFATTISS GEQIAARGQS PVDTGVAGLA DEAPSPASVG DNVNIANMAS LQSKKVLYSD 
ATGNASETLL GGFSKMATNV GMYVHGTEIQ LTSQENVFDQ INARRESYSG VNLDEEAANL 
LRFQQAYQAS AQIIQTSQSL FQSLLGAVRL