| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1464 |
|---|
| Symbol | |
|---|
| ID | 3761944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1583227 |
|---|
| End bp | 1584252 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637786195 |
|---|
| Product | flagellin-like |
|---|
| Protein accession | YP_391730 |
|---|
| Protein GI | 78485805 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTTT CAAGTAACCA ATTTCATATG CAAAGTTTTT CGGCGATTGA AAAACACCAA
AACTCGGTGT TGGACATTCA AGAAAAACTG ACTACCGGTA ATCGAGTTAA TCGACCCAGC
GATGATCCTA TTGCAACCAG TCAAATTCAT TCTTTGAATA AAGCTGTAAA CACCATTTCT
CAATTCGAAA AAAATGGTGA ATTTGCCAAA TCGCAACTGT CATTGGAAGA AAGTCAGATT
TCTACAGCGG TTGATTTGAC TCAAAGAGCG CGAGAATTAA GCATTCAAAT GATGAACGGA
ACGTATACTG CAGAAGATAG ACAAGCAACC GCGCAAGAGA TCGGTCAAAT TATTAAACAT
TTGACTGGGA TTATGAACAG CAATAATTCG GAAGAAGAAT TGTTGTTTGC GGGGAACAAT
GTGGATGCTG CGGCCGCTTT TGTCGTTGAT CCTGCAAATT CCGGCGCCTT ACAACCTGGA
AATGAATATT ATGCTTATAT CGGGAGTGCA AATGCTGGCG CCCAATTTGA TAATCGAGCT
AATTTCGGGT CGCGTTTTGT TCAAATAGGG TTTGATAATG ACCAGACAGC GGCGCCAGAT
GATAAAGGCG ATTCAAGTCG CGTTCGAATC ACGGATAATG GGGCTAAAGT GTTCAATATC
CCTGGTGGTG CAACGTCTTT ACCGGCTGGT GTAGACCCGA ATTTATTAAA TGTTTTGGTG
GGGTTGAAAG ATTCGCTTGA TCAGGGGAAC CCTCCGCCTG ATGCGGTAGC CGATGATTTA
CTATCAGCCG TAAAAGGCTT GTCTAAGCAA CAAGCTGAAA TAGGAAGTCG ACAAAATCGT
ATTCAAACTC AGTTCGAGGC AGGACAGACT TTTTCAATGG CCTTGCAAGA AAGAAGGGTC
AATATTGAAG AAATGGATGT GGTTGAGGGT ATTTCACAGC TGAATATGCG TCAGAATGCT
TTGCAAATGG CACAGCAGGT CTTTTCTAAA GTACAAGGCA TGTCCTTGTT TGATTATTTA
AGGTAA
|
|---|
| Protein sequence | MRVSSNQFHM QSFSAIEKHQ NSVLDIQEKL TTGNRVNRPS DDPIATSQIH SLNKAVNTIS
QFEKNGEFAK SQLSLEESQI STAVDLTQRA RELSIQMMNG TYTAEDRQAT AQEIGQIIKH
LTGIMNSNNS EEELLFAGNN VDAAAAFVVD PANSGALQPG NEYYAYIGSA NAGAQFDNRA
NFGSRFVQIG FDNDQTAAPD DKGDSSRVRI TDNGAKVFNI PGGATSLPAG VDPNLLNVLV
GLKDSLDQGN PPPDAVADDL LSAVKGLSKQ QAEIGSRQNR IQTQFEAGQT FSMALQERRV
NIEEMDVVEG ISQLNMRQNA LQMAQQVFSK VQGMSLFDYL R
|
|---|
| |