Gene Tcr_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1449 
Symbol 
ID3760796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1565569 
End bp1567914 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content42% 
IMG OID637786180 
Productflagellar hook-associated 2-like 
Protein accessionYP_391715 
Protein GI78485790 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000641782 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACG AAATAGGTAG TACTCTTTTA AATAGCTTAA CCAACAGTAC ATTTGATATT 
GGAAATATGT CAAAAGCTTT AGCAACGGCA GAAGTTGCAG GGCCTAAGGC TATTTTAGAA
AGAAATGTTG AAAAGGTAAC CACTGAACTG GATGCGTTTA AGTACTTGCA GACAAATCTT
GAAGCGTTTA ACAGTTATGT AACCGATTTG TCTTCGCCCA CTTTGTTTAG TCAGAAAAAT
ACGTCCTCTT CAAATGAGAC GCTTGTCTCT GTTACAGCAA CGAATTCTGC GGCATTGGCC
AGTTATCAAA TCGAATCTCG ACAGTTAGCT CAAGCGCATA CGATGGTCGC TAATAAAGGG
TTTACATCTC CTTCCGATAC CTTATCAACG GGAACCTTAA CCATTGATGT CGGTGGGCAG
GTCTCCAACA TCACGGTTGA TGCCTCCAAT AACACTTTGG AAGGGTTGCA AAAAGTGATT
AATAACGGTG ATTATGGTGT TACCGCTTCG ATTATTAATA ATGGCGGCTC TTATCAAATG
ATGTTTACAT CAAAAGAAAG TGGTGCGGCT GGCGAAGCGA CTATTTCAGG GATTGCTGAT
TTTGATACGA ATGGTTTTAC CACGACATCA CAAGCGCAAG ATGCTGTAAT GGTTTTAAAT
GGTGTCACGG TTACAAATTC TACCAACACT TTTGATCAAG TTATTGATGG CGTCACTTTT
CAATTGAATT CCGCATCTAT AGGAACCACC AGTACCGTTT CAGTTGGGCA GGATTCTCAA
AGTGTTAAAG ATACGATTAC CAGTTTTGTC GATGTCTACA ATCAATTGGA TACGATTTTA
GACGAGCTTG GAAAGTATGA TACCAGTGAC TTAACGGAAG AAGAGCTGGC ATCAGAAGAG
TATAAATACT ATGGCGATTT AGCGGGGAAC AGTTTATTGC GTTCCGTTAA ATACCAAATT
AGAGAATCGA TGTCAGGAGC CATCAGTCAG CTTGCTGGTG GCAGCTATCA GTCTTTAGCC
GATATAGGCA TTAACTTTAC ACGAGACGGT GCTTTAGAAG TAGACAGCGC CAAGCTTGAT
ACGGCGCTAT CAACAGATAT GAGTGCACTG TCGACAATGT TTGCAAAAGG CGGTACAAGT
GATGATGCTC TAGTAAATGT ATTATCAGGA AGTGATAAGA CGCAGACCGG AGATTATGCT
TTAAACATTA CTCAATTGGC GGATAGAGCA ACGGTAACAG GCGGTGCGGT TACTGGCCTG
ACGACAGATG AACAGGTTGC GGGTGATCGT ATCAGTGACC TGACTTCTGC CTTAACGATT
GATGCTTCAG CCAGTTTTGA TTTAAATGTT AATGGGACGG TTAACACGAT TAATTTAGCG
TCTGTGGCTC AAACGTATGC AACAAAAGAT GAGGTAGCGA CTGCAATTCA AGGGCAAATT
GATGCCGCCT TTGGGGCTGG AGTGGTTGCC ATTTCATATG ATTCGGCTCA ATCACGATTT
GAGCTTAATG CAGCAGCCGG TCAAGGAACG GTAGATATTG CCTCAACAAC CGGCATGTCA
AATCAAGGGT TTGGAGCTGC AACATATGCA GGGCAACAAC TATTGGATCT GGGAGCAACA
GACGCCACTT TTAATGTCAA AATCGATGAG TCTACAACGT CGGCCGTAAC CGTAACAGCA
GGCCGATATA CCATGGATGA GTTAGCGCTT ACAATGGCCT CAACGATTAA TAACAATGCA
GATGTTAAGG CTTCAGGCGC TGAAGTCAGT GTGACGCATG ATGGAAGTGC TTTTACAGTC
ACGTCAACAC GTTTTGGCGG GTTTTCAAAT GTCGAGTTAA CCGGGTTTGC TAACTTTGCA
GCAGCCGGTT TTACCACCGA TGTTCTTGAT GCAGGGCAAA ATGTGGACGG TACTTTGACT
ACAGCAAGCG GTTCATTGAA TATTGGTGCT TACGCCAGTG CGACGGATGG TCGTCAAGTA
AAAATCAGTG ACTACGCCAT GATTTCTGGA AATGAAGCAG AAGTCAGAGG ACTTGAGTTT
GAGGTCATTG GGGGAACAAC CGGTGCGCGA GGTACGATTA GTTATTCGGA AGGGTATGCA
AGTCAGTTGG AAACAACCAT TAACGATTTG TTTAAAGCGG ATACTGGATT GTTGAGTACG
AGAATGAGTA ATTTGAATGA TCGACTTGAT CGTTACGATG AAAAAACAAA AGATATTGAT
ACACGATATG AAAAACTATT AGCGAAATAT CAAATGCAGT TCTCTATGCT ACAGTCATTG
ATTAATAGCT CAGAACAAAC CAGAAATATG CTTACGGCAA CTTACAATAA TAACAATAAT
AATTAA
 
Protein sequence
MANEIGSTLL NSLTNSTFDI GNMSKALATA EVAGPKAILE RNVEKVTTEL DAFKYLQTNL 
EAFNSYVTDL SSPTLFSQKN TSSSNETLVS VTATNSAALA SYQIESRQLA QAHTMVANKG
FTSPSDTLST GTLTIDVGGQ VSNITVDASN NTLEGLQKVI NNGDYGVTAS IINNGGSYQM
MFTSKESGAA GEATISGIAD FDTNGFTTTS QAQDAVMVLN GVTVTNSTNT FDQVIDGVTF
QLNSASIGTT STVSVGQDSQ SVKDTITSFV DVYNQLDTIL DELGKYDTSD LTEEELASEE
YKYYGDLAGN SLLRSVKYQI RESMSGAISQ LAGGSYQSLA DIGINFTRDG ALEVDSAKLD
TALSTDMSAL STMFAKGGTS DDALVNVLSG SDKTQTGDYA LNITQLADRA TVTGGAVTGL
TTDEQVAGDR ISDLTSALTI DASASFDLNV NGTVNTINLA SVAQTYATKD EVATAIQGQI
DAAFGAGVVA ISYDSAQSRF ELNAAAGQGT VDIASTTGMS NQGFGAATYA GQQLLDLGAT
DATFNVKIDE STTSAVTVTA GRYTMDELAL TMASTINNNA DVKASGAEVS VTHDGSAFTV
TSTRFGGFSN VELTGFANFA AAGFTTDVLD AGQNVDGTLT TASGSLNIGA YASATDGRQV
KISDYAMISG NEAEVRGLEF EVIGGTTGAR GTISYSEGYA SQLETTINDL FKADTGLLST
RMSNLNDRLD RYDEKTKDID TRYEKLLAKY QMQFSMLQSL INSSEQTRNM LTATYNNNNN
N