Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1449 |
Symbol | |
ID | 3760796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1565569 |
End bp | 1567914 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637786180 |
Product | flagellar hook-associated 2-like |
Protein accession | YP_391715 |
Protein GI | 78485790 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000641782 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACG AAATAGGTAG TACTCTTTTA AATAGCTTAA CCAACAGTAC ATTTGATATT GGAAATATGT CAAAAGCTTT AGCAACGGCA GAAGTTGCAG GGCCTAAGGC TATTTTAGAA AGAAATGTTG AAAAGGTAAC CACTGAACTG GATGCGTTTA AGTACTTGCA GACAAATCTT GAAGCGTTTA ACAGTTATGT AACCGATTTG TCTTCGCCCA CTTTGTTTAG TCAGAAAAAT ACGTCCTCTT CAAATGAGAC GCTTGTCTCT GTTACAGCAA CGAATTCTGC GGCATTGGCC AGTTATCAAA TCGAATCTCG ACAGTTAGCT CAAGCGCATA CGATGGTCGC TAATAAAGGG TTTACATCTC CTTCCGATAC CTTATCAACG GGAACCTTAA CCATTGATGT CGGTGGGCAG GTCTCCAACA TCACGGTTGA TGCCTCCAAT AACACTTTGG AAGGGTTGCA AAAAGTGATT AATAACGGTG ATTATGGTGT TACCGCTTCG ATTATTAATA ATGGCGGCTC TTATCAAATG ATGTTTACAT CAAAAGAAAG TGGTGCGGCT GGCGAAGCGA CTATTTCAGG GATTGCTGAT TTTGATACGA ATGGTTTTAC CACGACATCA CAAGCGCAAG ATGCTGTAAT GGTTTTAAAT GGTGTCACGG TTACAAATTC TACCAACACT TTTGATCAAG TTATTGATGG CGTCACTTTT CAATTGAATT CCGCATCTAT AGGAACCACC AGTACCGTTT CAGTTGGGCA GGATTCTCAA AGTGTTAAAG ATACGATTAC CAGTTTTGTC GATGTCTACA ATCAATTGGA TACGATTTTA GACGAGCTTG GAAAGTATGA TACCAGTGAC TTAACGGAAG AAGAGCTGGC ATCAGAAGAG TATAAATACT ATGGCGATTT AGCGGGGAAC AGTTTATTGC GTTCCGTTAA ATACCAAATT AGAGAATCGA TGTCAGGAGC CATCAGTCAG CTTGCTGGTG GCAGCTATCA GTCTTTAGCC GATATAGGCA TTAACTTTAC ACGAGACGGT GCTTTAGAAG TAGACAGCGC CAAGCTTGAT ACGGCGCTAT CAACAGATAT GAGTGCACTG TCGACAATGT TTGCAAAAGG CGGTACAAGT GATGATGCTC TAGTAAATGT ATTATCAGGA AGTGATAAGA CGCAGACCGG AGATTATGCT TTAAACATTA CTCAATTGGC GGATAGAGCA ACGGTAACAG GCGGTGCGGT TACTGGCCTG ACGACAGATG AACAGGTTGC GGGTGATCGT ATCAGTGACC TGACTTCTGC CTTAACGATT GATGCTTCAG CCAGTTTTGA TTTAAATGTT AATGGGACGG TTAACACGAT TAATTTAGCG TCTGTGGCTC AAACGTATGC AACAAAAGAT GAGGTAGCGA CTGCAATTCA AGGGCAAATT GATGCCGCCT TTGGGGCTGG AGTGGTTGCC ATTTCATATG ATTCGGCTCA ATCACGATTT GAGCTTAATG CAGCAGCCGG TCAAGGAACG GTAGATATTG CCTCAACAAC CGGCATGTCA AATCAAGGGT TTGGAGCTGC AACATATGCA GGGCAACAAC TATTGGATCT GGGAGCAACA GACGCCACTT TTAATGTCAA AATCGATGAG TCTACAACGT CGGCCGTAAC CGTAACAGCA GGCCGATATA CCATGGATGA GTTAGCGCTT ACAATGGCCT CAACGATTAA TAACAATGCA GATGTTAAGG CTTCAGGCGC TGAAGTCAGT GTGACGCATG ATGGAAGTGC TTTTACAGTC ACGTCAACAC GTTTTGGCGG GTTTTCAAAT GTCGAGTTAA CCGGGTTTGC TAACTTTGCA GCAGCCGGTT TTACCACCGA TGTTCTTGAT GCAGGGCAAA ATGTGGACGG TACTTTGACT ACAGCAAGCG GTTCATTGAA TATTGGTGCT TACGCCAGTG CGACGGATGG TCGTCAAGTA AAAATCAGTG ACTACGCCAT GATTTCTGGA AATGAAGCAG AAGTCAGAGG ACTTGAGTTT GAGGTCATTG GGGGAACAAC CGGTGCGCGA GGTACGATTA GTTATTCGGA AGGGTATGCA AGTCAGTTGG AAACAACCAT TAACGATTTG TTTAAAGCGG ATACTGGATT GTTGAGTACG AGAATGAGTA ATTTGAATGA TCGACTTGAT CGTTACGATG AAAAAACAAA AGATATTGAT ACACGATATG AAAAACTATT AGCGAAATAT CAAATGCAGT TCTCTATGCT ACAGTCATTG ATTAATAGCT CAGAACAAAC CAGAAATATG CTTACGGCAA CTTACAATAA TAACAATAAT AATTAA
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Protein sequence | MANEIGSTLL NSLTNSTFDI GNMSKALATA EVAGPKAILE RNVEKVTTEL DAFKYLQTNL EAFNSYVTDL SSPTLFSQKN TSSSNETLVS VTATNSAALA SYQIESRQLA QAHTMVANKG FTSPSDTLST GTLTIDVGGQ VSNITVDASN NTLEGLQKVI NNGDYGVTAS IINNGGSYQM MFTSKESGAA GEATISGIAD FDTNGFTTTS QAQDAVMVLN GVTVTNSTNT FDQVIDGVTF QLNSASIGTT STVSVGQDSQ SVKDTITSFV DVYNQLDTIL DELGKYDTSD LTEEELASEE YKYYGDLAGN SLLRSVKYQI RESMSGAISQ LAGGSYQSLA DIGINFTRDG ALEVDSAKLD TALSTDMSAL STMFAKGGTS DDALVNVLSG SDKTQTGDYA LNITQLADRA TVTGGAVTGL TTDEQVAGDR ISDLTSALTI DASASFDLNV NGTVNTINLA SVAQTYATKD EVATAIQGQI DAAFGAGVVA ISYDSAQSRF ELNAAAGQGT VDIASTTGMS NQGFGAATYA GQQLLDLGAT DATFNVKIDE STTSAVTVTA GRYTMDELAL TMASTINNNA DVKASGAEVS VTHDGSAFTV TSTRFGGFSN VELTGFANFA AAGFTTDVLD AGQNVDGTLT TASGSLNIGA YASATDGRQV KISDYAMISG NEAEVRGLEF EVIGGTTGAR GTISYSEGYA SQLETTINDL FKADTGLLST RMSNLNDRLD RYDEKTKDID TRYEKLLAKY QMQFSMLQSL INSSEQTRNM LTATYNNNNN N
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