| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1442 |
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| Symbol | |
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| ID | 3760789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1558817 |
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| End bp | 1560502 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637786173 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_391708 |
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| Protein GI | 78485783 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATC AACCATCTCT TGATCCTACT TTAAGTTCGT CAAAAGCCGC GGAAGGTTCT
CCCCTCCTAA AAAATTTAAC GTCTTTATCG GTTGCGAAGC AAGTCAGCTT AGTTATCGCG
CTGGCAGCCA GTGTGGCGCT AGCGATCGGT ATTATCCTTT GGTCTCAGTC TGCAAGCTAT
ACACTGCTGT TTGGAAGCAT GGATGCTAAA GACATGAATG AAGTCATTCA GACGTTAGAC
CAAGAAAATG TGCCCTATAA AATTGAACAA AACTCAGGCG CCATCTTAGT GCCGAATGAG
CAAGTTCATT CTTTACGACT CAAACTAGCC GCCCAAGGCT ATCCTAAGCA AGCCCCTACG
GGTTATCAAA TTCTGGATAT CGATCAGGGG TTTGGTATTT CTCAGTTTAA AGAAACCACG
CGCTATCAAC GAGCTCTAGA AGGAGAGCTG GCCAAATCCG TATCAAGTAT TAATGCGGTA
AAATCGGCAC GTGTGATGCT CGGTATGCCG AAACGTTCCG TTTTTGTTCG TAAACAACAA
GAACCTACCG CATCGGTAAC CGTCAAACTT TATCCGGGCC GAGCGTTGAA TGAAGAACAG
GTCAGCGCGA TTGTTTATTT GGTTTCTTCC AGTATTCCAA ATATGAAGCC TAAAGGGGTA
ACGGTTGTTG ATCAGCAAGG TAACTTGTTA ACCAGTGATT CTCATTCCGG CATCATGAAC
GTGAGTCTCA AGCAATTAGG CTATACGCGT CAAGTAGAAG ATACACTTTC TCAAAGAATT
ATTCGTCTGT TGACGCCTGT CGCAGGTGGT GACCATAAGG TAAGAGCGCA GGTAACGGCT
GAGCTGGACT TTACTCAGCA AGAGCAAACG CGTGAAAATT ATGAACCTGA TCCGGAAGCC
ATTCGATCTG AACAAGAAAT TAAAGAAATT AACCGAAATG AAGGCCCTAT GGGGATTCCC
GGCGCTTTAA CCAATCAGCC ACCTCGTGCA GGGATTGCAC CTGAAGAAGG TTATAAGCCT
GAAAATGATC CTAATCTGAA AAACTCGAAA GAGAAGAAAA CCAAAAACTA TGAGCTGGAT
CGAACGGTCA GTCATATTAA AAACTCCGTC GGCAGCATTA GACGATTGTC GGTTGCAGTG
GTTTTGGATG ATAAGTTAAC CGTTGATGAT AATGGCGATA CGGTCAGAAC GCCTTTGACA
GAGGACGAGC TGCAACGTTA TCGCCGTTTG GTTAGCGATG CAGTTGGTTT GGATGAAGCA
CGAGGGGATA CTTTAAGTAT CGTGAACGCC TCCTTTATTC AAGAGAAACA AGAAGATTTT
GCAGGGCCGG AAATTTGGGA AGAACCTTGG TTCTGGACGT TGGTTAAGCA AATCTTAGCA
GGCCTGGCTG TTTTAATTAT TATCTTCGGT GTGATCAGAC CAATGCTGAA AGATCTGTCA
AAACGCGAAG AAGTTGCAAT GGATTATCCT GAGGATGTGC CTGAGGAAGA AGAAGAGCTT
GAAAATGCGG ATGAAATTTC TAGAGCACTA GAACAGATGA ACGAAGAAGT CGAACAGAAA
GCCGAAGAGG TGGATGAAGA CTCTGAAAAA GATAAAGAAA TGCTGGAAAA AGTTAAAGCT
GTTGTATCGG CTGATCCGAA GCTAGCGGCA CATATCATCA AGCAATGGAT GTCGAAGGGA
GACTAA
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| Protein sequence | MPDQPSLDPT LSSSKAAEGS PLLKNLTSLS VAKQVSLVIA LAASVALAIG IILWSQSASY
TLLFGSMDAK DMNEVIQTLD QENVPYKIEQ NSGAILVPNE QVHSLRLKLA AQGYPKQAPT
GYQILDIDQG FGISQFKETT RYQRALEGEL AKSVSSINAV KSARVMLGMP KRSVFVRKQQ
EPTASVTVKL YPGRALNEEQ VSAIVYLVSS SIPNMKPKGV TVVDQQGNLL TSDSHSGIMN
VSLKQLGYTR QVEDTLSQRI IRLLTPVAGG DHKVRAQVTA ELDFTQQEQT RENYEPDPEA
IRSEQEIKEI NRNEGPMGIP GALTNQPPRA GIAPEEGYKP ENDPNLKNSK EKKTKNYELD
RTVSHIKNSV GSIRRLSVAV VLDDKLTVDD NGDTVRTPLT EDELQRYRRL VSDAVGLDEA
RGDTLSIVNA SFIQEKQEDF AGPEIWEEPW FWTLVKQILA GLAVLIIIFG VIRPMLKDLS
KREEVAMDYP EDVPEEEEEL ENADEISRAL EQMNEEVEQK AEEVDEDSEK DKEMLEKVKA
VVSADPKLAA HIIKQWMSKG D
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