Gene Tcr_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1412 
Symbol 
ID3760779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1524870 
End bp1525676 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content39% 
IMG OID637786145 
Producthypothetical protein 
Protein accessionYP_391680 
Protein GI78485755 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAT TACTGATTTT AATCCCAATT TTATTAATTA GCGGCATGAT CGCTGGGCTC 
TTGGCTGGGC TACTAGGTGT TGGTGGTGGA ATTGTTATAG TCCCGATGCT ATATCATATT
TTTATTTATC TGAATATTGA TATATCGATT GCTATGCCAT TGGCCATAGG AACCTCATTA
TCCACTATTG TCGTGACATC AATTATGTCC GCTAGGTCCC ATCACAAGAA AGGCGGCATT
GACTGGGACT TGGTAAAAGT TTGGTTGCCA TTTGTCATAA TAGGGGTCTT CATAGGAGCC
TTTTCCGCAA ACTTCATAGA TGGCGTAACT CTGAAGGTCA TGTTTGGTGT TTTGCTCTTA
GTTATCTCTG TACATATGAT AATCAGTATA AGAAGGAGTT TAGTTATCGC TAAACAACTT
CCAAGTTTTC CAGGACAACC TATTTTTGCA ACTTTGATCG GAACATTTTC GTCAATCTTA
GGGATTGGTG GAGGAACATT AATGGTTCCA TTGTTGACAC TTTTTTCTTA TCCAATACAC
AAAGCAGTCA GCACCGCATC TTTGTTTGGT TTAGTCATCA GTATCCCTGC AACACTCGGG
TATATTTTTA TTGGTTGGGA TGTTCCTAAC TTGCCTACTG GCTCAACAGG ATATGTTAAC
TGGCTTGGTT TTATAGCTTT AGTTCCAATG ACAATGGTTT TTGCGCCTTT GGGAGTAAAG
TTGGCGTATT TCCTTAATGT TAAACAGCTA AAAACAGCTT TTGCAATTTT TCTAGCGCTT
GTTGGGATCA AGATGCTTTT GGTCTGA
 
Protein sequence
MNELLILIPI LLISGMIAGL LAGLLGVGGG IVIVPMLYHI FIYLNIDISI AMPLAIGTSL 
STIVVTSIMS ARSHHKKGGI DWDLVKVWLP FVIIGVFIGA FSANFIDGVT LKVMFGVLLL
VISVHMIISI RRSLVIAKQL PSFPGQPIFA TLIGTFSSIL GIGGGTLMVP LLTLFSYPIH
KAVSTASLFG LVISIPATLG YIFIGWDVPN LPTGSTGYVN WLGFIALVPM TMVFAPLGVK
LAYFLNVKQL KTAFAIFLAL VGIKMLLV