Gene Tcr_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1401 
SymbolnrdR 
ID3762037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1513860 
End bp1514324 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID637786135 
Producttranscriptional regulator NrdR 
Protein accessionYP_391670 
Protein GI78485745 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.124878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC CATTTTGTAA CGCACCTGAT ACGAAAGTAA TCGACTCTCG CCTCGCAACA 
GAGGGGGCGC AGGTTCGTCG CCGTCGTGAA TGTATGAGCT GTGCAGAACG CTTTACAACG 
TATGAGACCG CAGAGTTGAC ATTGCCTCGT GTGATTAAGT CGGACGGAAA TCGTGAGCGC 
TTTGATGACG ATAAAATTCG TCGAGGTCTG ATAAAAGCGT TGGAAAAACG CCCTGTTGCC 
AGTGAAGCGA TTGACCAGGT TGTGAATCGC ATTCATAAGC AATTGACGGC TGAAGGGGTT 
CGAGAAATCC CTTCTTCTCA AATAGGGGAG CTGTTAATGG AAGCGCTTAA AGAGTTGGAT 
CAAGTTGCTT ATGTCCGCTT CGCCTCTGTT TACCGTTCTT TTCAAGACGT CAATGCTTTT 
CGAGAAGAAA TTGAAAAGCT GGTCAAAGCG ACTAAATCGC AATAA
 
Protein sequence
MHCPFCNAPD TKVIDSRLAT EGAQVRRRRE CMSCAERFTT YETAELTLPR VIKSDGNRER 
FDDDKIRRGL IKALEKRPVA SEAIDQVVNR IHKQLTAEGV REIPSSQIGE LLMEALKELD 
QVAYVRFASV YRSFQDVNAF REEIEKLVKA TKSQ