Gene Tcr_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1399 
Symbol 
ID3762035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1512020 
End bp1512685 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID637786133 
Productriboflavin synthase subunit alpha 
Protein accessionYP_391668 
Protein GI78485743 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.706898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACCG GTATTATTGA AACGGAAGGT TTTGTTTCAC GTATTGAACC CGTTAATGGC 
GATGCGCGTA TGACCATTGA GGTCGGTAAG CTGGATATGT CGGATGTAAA AATCGGTGAC 
AGTATTGCCT GTAATGGGGT GTGTTTGACT GCAATTGAGT TAACCCCCTC TGCCTATGTA 
GCGGATGTGT CGTCAGAAAC ATTAAAGGTT ACCACCTTAG GTGCTTTGAA AGTCGGTTCT 
CCAGTTAATC TGGAAAAAGC GTTACGCCTT CAAGATCGTT TGGGGGGACA CTTGGTTAGC 
GGGCATGTCG ATGGCGTCGG GAAGGTGCTA TCGATTACCC AGGAAGCACG TTCTTGGCGT 
TACCAAATTG AAGCCCCCGT TGCGTTGGCG AAATACATTG CAGGTAAAGG CTCGATTTGC 
ATTAACGGCA TTAGTTTGAC GGTGAACCAA GTCGATGGCT GCGCGTTTGA TGTCAACATT 
GTGCCGCATA CCCGACAAGA AACAACGATT AAACATTTCC AAGTGGGAAC AACCGTTAAT 
CTGGAAGTGG ATTTGCTGGC GCGCTATTTA GAAAGAATGT TAAGCGCGCC GAAAGACACG 
GAACAATCAG ATACAAACCC GTCTAAAATC ACGCGTGAAT TATTATCCGA TCGCGGTTTT 
TTGTAA
 
Protein sequence
MFTGIIETEG FVSRIEPVNG DARMTIEVGK LDMSDVKIGD SIACNGVCLT AIELTPSAYV 
ADVSSETLKV TTLGALKVGS PVNLEKALRL QDRLGGHLVS GHVDGVGKVL SITQEARSWR 
YQIEAPVALA KYIAGKGSIC INGISLTVNQ VDGCAFDVNI VPHTRQETTI KHFQVGTTVN 
LEVDLLARYL ERMLSAPKDT EQSDTNPSKI TRELLSDRGF L