Gene Tcr_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1396 
Symbol 
ID3762032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1509862 
End bp1510347 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID637786130 
ProductNusB antitermination factor 
Protein accessionYP_391665 
Protein GI78485740 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAT CCGATTTTAA ACCTGGCGAA GGGACGGAAG TTCCTGAAGA AGAAAAAAGC 
GTTAGTGTCA GAACGCAAAC ACGTCGCGTG GCGCTTCAGG CCTTGTATCA GTGGCAGGTG 
AATCATTCTG AAACCGTAGA TATTATTAAG CAGTTTTCGG AAGAAGGGCG CTTGGTGGAT 
ACAGATGTGG CTTTGTTTCA AGAAATTGTG AATGAAGTGG CTAATCATGC GGCCGATTTA 
GATGAGCTTT ACGCCCCGTT CTTGGACAGA GCCGTGGCAC GTATCGACCC AGTTGAAAAA 
AACATCATGC GTATGGGCGT ATTTGAATTG CAAAACAAAC TGGAAATTCC ATACAGAGTT 
GTCATTAATG AATCTGTTGA GTTGGCAAAA CGATTTGGCG CGGAAGACAG TCATAAATAC 
ATTAACGGTA TTTTAGATAA AGCCGCTGAG GGTTTAAGAA GTTTGGAAAA AACACAAACA 
GATTAA
 
Protein sequence
MNLSDFKPGE GTEVPEEEKS VSVRTQTRRV ALQALYQWQV NHSETVDIIK QFSEEGRLVD 
TDVALFQEIV NEVANHAADL DELYAPFLDR AVARIDPVEK NIMRMGVFEL QNKLEIPYRV 
VINESVELAK RFGAEDSHKY INGILDKAAE GLRSLEKTQT D