Gene Tcr_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1387 
Symbol 
ID3762023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1501255 
End bp1501857 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content46% 
IMG OID637786121 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_391656 
Protein GI78485731 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.74329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAT TAGTTACTAA AAAAGCGCCC GATTTTACTT CAGCCGCCGT TCTTGCAGAC 
GGAACGATTG TGGACGACTT CAACCTAAAA AGCCACATTG ACGGAAAGTA TGCCGTTGTG
TTCTTTTACC CTCTAGACTT CACATTTGTT TGTCCATCAG AAATTCTGGC ATTTGACCAT
CGTGTCGAAA AATTCAAAGA ACTGGGCACT GAAGTGATCG GTGTTTCTGT TGACTCTCAA
TTCACTCACA ACGCATGGCG CAACACCCCT GTAAACGAAG GTGGACTAGG GCCTGTTAAA
TTCCCATTGG TTGCAGATTT AGGTGGGTCA ATCATGGACG CTTACGGCAT TGTGCACCCA
GGTAACGTTG CACTGCGTGG TGCATTCTTA ATCGACAAAG AAGGGGTGGT TCGTCACCAA
GTTGTCAACG ATTTACCTTT AGGTCGTAAC GTTGACGAAA TGGTTCGTAT GGTTGAAGCC
CTTCAATTCC ACGAAGAAAA TGGTGAAGTT TGCCCAGCCG GTTGGAACAA AGGCGACGAA
GGGATGAAAG ATTCTCCTGA AGGTGTGGCT GACTACCTTT CAAAACACGG TGAAGAGCTA
TAA
 
Protein sequence
MSVLVTKKAP DFTSAAVLAD GTIVDDFNLK SHIDGKYAVV FFYPLDFTFV CPSEILAFDH 
RVEKFKELGT EVIGVSVDSQ FTHNAWRNTP VNEGGLGPVK FPLVADLGGS IMDAYGIVHP
GNVALRGAFL IDKEGVVRHQ VVNDLPLGRN VDEMVRMVEA LQFHEENGEV CPAGWNKGDE
GMKDSPEGVA DYLSKHGEEL