Gene Tcr_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1365 
Symbol 
ID3760751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1479632 
End bp1480147 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content43% 
IMG OID637786099 
Productflavodoxin, long chain 
Protein accessionYP_391634 
Protein GI78485709 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.180035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG TGGGTCTATT CTATGGAACG GATACGGGCA ATACAGAACG TGTTGCAGAT 
ATGATTAAGG ATAAAATTGG CAGCGATATT GTAGATGTGC ATGATATTGC GACAGCAAGT
GCTGATGACT TTGCCAAATA CGACAAGATT ATCCTTGGTC AACCGACTTG GTATTATGGT
GAGCTGCAAA GCAGTTGGGA TGACTTCTGG GATGAATTTA AAGAGGTTGA TTTTACCGAT
AAAACCTTTG CTTGTTTCGG GTTAGGTGAT CAGGCCGATT ATGCCGAATA TTTCTTGGAT
GCGATGGGCA TGATGCATGA TATCGCTCTA GAGAACGGCG GTATCCCTAC TGGATACTGG
TCAACAGATG GTTATGAATT TGATGAGTCC AAAGCCGTTA CTGAAGATGG TGAGTTTTTT
GTCGGGCTGG CCATTGATGA AGATCAGCAA CCTGAAATGA CGGCTGAGAG AGTTGATCAA
TGGGTGGATC AAATTAAAGA CGAAATGTCG CTTTAA
 
Protein sequence
MSQVGLFYGT DTGNTERVAD MIKDKIGSDI VDVHDIATAS ADDFAKYDKI ILGQPTWYYG 
ELQSSWDDFW DEFKEVDFTD KTFACFGLGD QADYAEYFLD AMGMMHDIAL ENGGIPTGYW
STDGYEFDES KAVTEDGEFF VGLAIDEDQQ PEMTAERVDQ WVDQIKDEMS L