| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1356 |
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| Symbol | |
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| ID | 3760516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1472117 |
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| End bp | 1473502 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786090 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_391625 |
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| Protein GI | 78485700 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCGA TTTCTTTTCA ATCTTACCAA AACGAATTCA AACATCTGGT CCGTTTAGCC
ATTCCGATTT TATTGGCGCA GTTAGCTTTA ACTGGCTTGG GAGTGGTGGA TACGATCATG
TCCGGTCAAG TCGGAACGGA CGATTTGGCG GCCATAGGGT TGGGAACCAG TTTATTATTT
CCGGTTTTTA TGATTTCAAC CGGTATCTTG CTGGCCTTAA CGCCATTGGT GGCTAAACAA
AAAGGTCGTC AAAACTGGCA AGGCATTACA TACTATTTAC ATCAGTCTTT ATGGTTATCA
ATCCCATTAG GGCTCTTTTC CTTATTAACG TTGATGCACC TTCAATGGGT GTTGGATTTA
TTGACGTTAT CTTCAAATGT TTACCAGCTA ACCAACGACT ATTTGTTTTA TATCGCGTTT
GGCTTGCCAG GAATCGTGTT GTATCAAGCA TTTCGGTTCT TTTGGGAAGG GTTGGGGTTA
ACCATACCGA CCATGTTGAT TAGTTTTTTT GCTTTATTGC TGAACATACC TCTCAATGCT
GTATTCATTT ACGGTTGGGG ACCTGTTGAG GCTTACGGTG CAGCAGGGTG CGGTATTGCT
TCTGCTCTTG TGATGTGGGC CATGTTCGTA GTCAGTGTGA TTTATGTATT GAGCTCCGAA
AAAACCCGTT CTCTCGTCTG TTTAAAACTC TCTTTGTTTG AACGCCCGAG CTGGTCAAAA
GGCATTTCCG ATATTTTATC CTTAGGCATT CCGAATACGT TGGCTTTGTT ATTTGAAGTC
AGTTTGTTCA GCTTTATTGC TTTATTTATT GCGCAGTTGG GTACTGTCGT CATCGCCGCT
CATCAAGTGG CCATCAGCTA TACCTCGTTG GCTTTTATGG TGCCCTTGAG TGTGGCGATG
GCCATTACGG TTCGGGTTGG GGAAGCTTAT GGACAAGGGT CGTTAAAGGC TCTTAAGGTC
AGTGTGCGAA CCGGGGTCGG GTCGGCGGCC TTGTTCAGTG GTGTCATTGC ATTATTTACC
TACGCCATGA TGCAAGACAT TGCCGCGTTG TATACCACCG ATACCAAGGT AATTCTCTTA
GCCGGAACCT TATTATTGTT TGCCGCGTTT TATCAGGTAT TTGATGCCGT GCAAGTTGCA
TCAGCAGGCG CTTTAAGAGG ACTGCACAGC ACAAAAGTAA CCATGGTCGT CACTTTTATA
AGTTATTGGT TGATTGGTTT GGGGATGGGG TATGTGTTTG CCTTTACCGA TTGGGTTATT
CCTAAAAGTG GCGTCGCCGG CTTTTGGTTA GGGATTGTTC TGGGGTTAAT ATTGGCCGCT
GTGTTGTTGC AGATTAAGCT TCATGTTCTG GTTAAGCGTC TGACAAGAGA AGGGGAACTT
GCCTAA
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| Protein sequence | MSAISFQSYQ NEFKHLVRLA IPILLAQLAL TGLGVVDTIM SGQVGTDDLA AIGLGTSLLF
PVFMISTGIL LALTPLVAKQ KGRQNWQGIT YYLHQSLWLS IPLGLFSLLT LMHLQWVLDL
LTLSSNVYQL TNDYLFYIAF GLPGIVLYQA FRFFWEGLGL TIPTMLISFF ALLLNIPLNA
VFIYGWGPVE AYGAAGCGIA SALVMWAMFV VSVIYVLSSE KTRSLVCLKL SLFERPSWSK
GISDILSLGI PNTLALLFEV SLFSFIALFI AQLGTVVIAA HQVAISYTSL AFMVPLSVAM
AITVRVGEAY GQGSLKALKV SVRTGVGSAA LFSGVIALFT YAMMQDIAAL YTTDTKVILL
AGTLLLFAAF YQVFDAVQVA SAGALRGLHS TKVTMVVTFI SYWLIGLGMG YVFAFTDWVI
PKSGVAGFWL GIVLGLILAA VLLQIKLHVL VKRLTREGEL A
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