| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1351 |
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| Symbol | |
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| ID | 3760509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1466589 |
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| End bp | 1467830 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786083 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_391620 |
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| Protein GI | 78485695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000108585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTAG GATTGCTCAA GTATGCTTGG AAAAGTCCGG AAGATGAATT GCGTTTCTTT
CCGGAAGAAA AGCCGTTACA GAAAGAGTAT GACGTTGTAA TTATCGGTGG GGGCGGTCAT
GGAATGGCGT GCGCCTATTA TCTCGCAAAA GAACACGGCA TTACTAATGT CGCCGTGCTT
GAGCAGGGCT ATATTGGCGG AGGAAATACC GGTCGTAATA CCACGATTGT ACGATCCAAC
TATTTAACTT CCGAAGGCGT TAAATTCTAT GATGAGAGTC TGAAACTGTT TGACGATTTA
AGTGAAGATT TTGATTTGAA TATTTTTTAT TCCACTCGCG GTCATTTCAC TTTAGCGCAT
AACGACAGTG CATTGCGAAC CATGCGCTGG CGTGCAGAAG TGAATAAACA TCATGGCATC
GCCAGTGAGG TGGTGGATGT GGAAACGATT CAAAAAGACA TCCCTTATAT GGATGTGGAA
TGCAACGGTC AACACCCAGT AATGGGTGCT TTATATCATG CGCCTGGGGC GGTTGCAAGG
CATGATGCAG TTGCTTGGGG GTATGCCCGT GGCGCTCAAA TGCGGGGAGT GGAAATTCAT
CAGAAAACTC AAGTGATCGA CATTAAAACG GCTTCCGGAA GAGTGGTCGG AGTAGAAACC
AACCGTGGCT TCGTCAAGGC CAAAAAAGTC ATTTCGATGG TAGCTGGGTC GTCACCCAGA
ATCACTAATA TGCTCGACAT CAAAACGCCC ATAGAAGTGT TTCCATTGCA GGCCTGTGTC
ACCGAACCGG TCAAGCCTTT TATGAACACC ATTGTGGTTT CCGGTAGCTT GCATGTCTAT
GTTAGTCAAT CATCACGTGG TGAGTTGGTA ATGGGAGCGT CGGTTGATCC TGCGGAATTG
CACTCAACTC GTTCAACTCT GGATTTTGTA GAAGGGTTAA CGGACCAAAT GATGGATTTA
TTTCCTTTTA CCAGCCGTCT AAAGATCATG CGTCAGTGGG CCGGAATGAG TGACATCACA
CCGGATTTTG CTCCGATTAT GGGAAAAACC CAAATTGAAG GTTTTTACTT GGACAGTGGA
TGGGGAACTT GGGGTTTTAA GGCGACTCCG ATTAGCGGTA AGACAATGGC TTATACCGTA
GCTACCGATT CGGTTCATGA TCTGATTAAG CCTTTTAGTC TAGATCGGTT TGAAAAATTC
AACTTGGTGG GCGAGAAAGG GGCGGCTTCG GTCGGTCATT AA
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| Protein sequence | MPLGLLKYAW KSPEDELRFF PEEKPLQKEY DVVIIGGGGH GMACAYYLAK EHGITNVAVL
EQGYIGGGNT GRNTTIVRSN YLTSEGVKFY DESLKLFDDL SEDFDLNIFY STRGHFTLAH
NDSALRTMRW RAEVNKHHGI ASEVVDVETI QKDIPYMDVE CNGQHPVMGA LYHAPGAVAR
HDAVAWGYAR GAQMRGVEIH QKTQVIDIKT ASGRVVGVET NRGFVKAKKV ISMVAGSSPR
ITNMLDIKTP IEVFPLQACV TEPVKPFMNT IVVSGSLHVY VSQSSRGELV MGASVDPAEL
HSTRSTLDFV EGLTDQMMDL FPFTSRLKIM RQWAGMSDIT PDFAPIMGKT QIEGFYLDSG
WGTWGFKATP ISGKTMAYTV ATDSVHDLIK PFSLDRFEKF NLVGEKGAAS VGH
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