Gene Tcr_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1343 
Symbol 
ID3760705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1457780 
End bp1458643 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content46% 
IMG OID637786075 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_391612 
Protein GI78485687 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTC AAGTCATTAA TGGTAAAGTC GTTGCGAAAA CGGTCATAGA TCGGGTTAAA 
CAGCGTGTGC AACTACGAAA ATCTCAAGGT TTGAGAGCTC CGGGGTTGGC GGTGATTTTA
ATCGGAGACG ATCCTGCATC CAGCGTTTAT GTTAACAATA AAAAAAAGGC CTGCGAAGAG
GCTGGGCTGG TGTCCAAGTC TTGGAATTGG CCAAGCAAGG CGACGCAGTA TGAGTTGTTG
GAATTGATCA AACAGCTGAA TGAAGATACA TCAATTGATG GCATTCTGGT TCAATTGCCT
TTGCCGGATC ATATTGATGC AGAAACCATT ATTGAAGCGA TTCATCCAGA CAAAGATGTT
GACGGGTTCC ACCCTTATAA TATCGGGCGT TTGACGGTTC GTATGCCAAC CTTAAGGCCT
TGTACTCCTT ATGGCTGTAT GAACTTGCTG AATCATTATG ATTTGTCTGT TAAAGGTAAG
CACGCGGTGA TTGTCGGGGC ATCTAATATT GTCGGTCGTC CAATGTCTTT AGAGCTTTTG
TTGGCCGGAG CCACAACTAC CGTTTGCCAT CGTTTTACCG CCGACCTACA AACTCATGTC
AGTATGGCAG ATATTTTAGT GACAGCTGTG GGAAAGCCTA ATTTCATTCC TGCAGATTGG
ATCAAACCTG GTGCGATAGT TGTTGATGTG GGCATTAATC GTTTGCCGGA TGGTTCCTTG
ACCGGCGATG TGGATCCTCG CGCTCGCGAG GTAGCCGCTT ATGTCACCCC TGTTCCTGGG
GGGGTTGGGC CCATGACCAT TGCGACGTTG TTAGAAAATA CACTTAAAGC TTGTGAGATT
CATCAATTAG GAGCGGTTTC ATAA
 
Protein sequence
MSAQVINGKV VAKTVIDRVK QRVQLRKSQG LRAPGLAVIL IGDDPASSVY VNNKKKACEE 
AGLVSKSWNW PSKATQYELL ELIKQLNEDT SIDGILVQLP LPDHIDAETI IEAIHPDKDV
DGFHPYNIGR LTVRMPTLRP CTPYGCMNLL NHYDLSVKGK HAVIVGASNI VGRPMSLELL
LAGATTTVCH RFTADLQTHV SMADILVTAV GKPNFIPADW IKPGAIVVDV GINRLPDGSL
TGDVDPRARE VAAYVTPVPG GVGPMTIATL LENTLKACEI HQLGAVS