Gene Tcr_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1342 
Symbol 
ID3760704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1456884 
End bp1457573 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content45% 
IMG OID637786074 
Productglutamine amidotransferase class-I 
Protein accessionYP_391611 
Protein GI78485686 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAT TGATTCTGCA GCATACTGCG ACCGAGGGAG CTGGCGTGAT TTTGGATTGG 
TGTTCTCAAA AAGGAGCCGA TGTATCCTAT ATTAAGTTGT ATGAACCCCA ACCTCATTTT 
GTCTTAGGTG ACAGTTTTCA GCTGGTTGTG GTTCTGGGTG GTCCCATGAG CGTTAACGAT 
GAGAGCGGTT ATCCTTGGTT GAAAATGGAA AAGAGCTATA TTGCTCAGTG TATAGATGCT 
CAGATACCGG TTTTAGGAAT CTGTCTAGGC GCACAATTGA TTGCATCATC TCTAGGAGCC 
AAGGTTATGG CTAACTCAGA GCCTGAAATT GGCTGGCATA ATGTTGATGC TGTATCGAAT 
GAAGACGCAG ACGTTTTTCA GTTTCCAGCG TCCTTGTCGG TGTTTCATTG GCATGGAGAG 
ACATTCGAAC TACCGTTCGG AGCGATTCAT TTAGCCGAAA GCGCTGGGTG TGCTAATCAA 
GGGTTCCAGT TGGGCGATAA AGTGATTGGA TTGCAGTTTC ACCCCGAAAT TACTTCGAGC 
ACGATTGACG TGTGGATAAA GGATGCTGGG GAATCGCTCA AACATTCGAT GTATGTGCAA 
ACGGCAGATG AAATGACTTC TCAAGCGAAA GCCTTCTTGC CCAGTTCGAA AGCTTTTTTA 
TTTGACGTGT TGGATTATTT GGTGAAGTAA
 
Protein sequence
MKVLILQHTA TEGAGVILDW CSQKGADVSY IKLYEPQPHF VLGDSFQLVV VLGGPMSVND 
ESGYPWLKME KSYIAQCIDA QIPVLGICLG AQLIASSLGA KVMANSEPEI GWHNVDAVSN 
EDADVFQFPA SLSVFHWHGE TFELPFGAIH LAESAGCANQ GFQLGDKVIG LQFHPEITSS 
TIDVWIKDAG ESLKHSMYVQ TADEMTSQAK AFLPSSKAFL FDVLDYLVK