Gene Tcr_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1314 
Symbol 
ID3762184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1430281 
End bp1431642 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content49% 
IMG OID637786046 
Producthypothetical protein 
Protein accessionYP_391583 
Protein GI78485658 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125
[TIGR00089] RNA modification enzyme, MiaB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.95672e-10 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAC AACAACCAAC TGTCGGAATT GTCAGCTTAG GGTGCCCGAA AGCAACGGTC 
GATTCCGAAC GGATTCTGAC TCAATTAAAA GCGGAAGGGT ATCATCTGAC AAACTCTTAT
GAAGAGGCGG ATGCGGTGAT TGTGAATACG TGCGGATTCA TTGATTCGGC GGTGCAAGAG
TCATTGGACA CGATTGGCGA AGCGCTTGAT GAAAACGGTC GCGTGATTGT TACAGGGTGT
TTGGGTGCGA AAGACGGCGT GATTGAGAAG GTGCATCCGT CAGTGTTGGC GGTTTCCGGC
CCAGCGGCGT ATGAAGAAGT TTTGACCGCT GTGCATGAAG CGATTGCGCC ACCGAAACAT
GATCCGTTTG TGGATTTGGT GCCGCCGCAA GGCATTAAAC TGACACCAAA GCACTTTGCT
TATTTAAAGA TTTCAGAAGG GTGTAACCAC CGTTGCACTT TTTGCATTAT TCCGTCCATG
CGCGGCAACC TTGTCAGTCG CCCAGTGTCG GATGTGGTGG CGGAAGCGAG GCGTTTAAAA
GAAGCGGGCG TTAAAGAACT GTTGGTTGTC TCACAAGACA CGGCTGCGTA TGGCGTGGAT
GTTAAATATA AAACCGAATT TGCAGACGGT CGACCAACCA AAACCTCGAT GTTTGGGCTG
GCAGAAGCTT TAAGCGAACT GGGTATTTGG GTTCGATTGC ATTATGTGTA TCCGTATCCG
AATGTGGAAG ATGTGATTCC GTTGATGGCG GAAGGCAAGT TGTTGCCGTA TCTGGACATG
CCTTTGCAAC ATGCCGATCC GGATATTCTG AAAGCCATGA AACGCCCAGG AAATGTTGAT
AAAACACTTG AACGCATTAA GAAATGGCGT GAACAGGTAC CGGATTTAAC CATTCGTTCT
ACGTTTATTG TTGGCTTCCC GGGCGAAACG GAAGCGCAGT TCCAGAATTT GTTGGACTTT
ATTGAAGAAG CGCAACTGGA TCGTGTTGGT TGTTTTCAAT ACTCTCCAGT AGAAGGTGCG
GTGGCGAATG ATTTGGCCGA GCCGGTGCCG GATGAAGTCA AACAAGAGCG TTTTGATCGT
TTCATGCAGC TACAACAGCA AATCAGTGCG AATAAGATGC AAGCGAAAAT TGGCAAAACG
ATTCAAGTGC TGGTGGACGA AGTGGATGAA GAGGGCGCCA TTGCTCGTTC AAAAGCCGAT
GCGCCTGAAA TTGACGGCAT GGTGTTTATT CCAGAAGGGC ATCATTTGAA TCCGGGCGAT
TTTGTCGAGG TGGAAGTGTT TGCAGCGGAT GAATACGACT TATGGGCCAC GCCTGTCGGT
GAATTTGTGC CGCAAGAAAC GTCTTATGTT GAGCTGGGTT AA
 
Protein sequence
MSQQQPTVGI VSLGCPKATV DSERILTQLK AEGYHLTNSY EEADAVIVNT CGFIDSAVQE 
SLDTIGEALD ENGRVIVTGC LGAKDGVIEK VHPSVLAVSG PAAYEEVLTA VHEAIAPPKH
DPFVDLVPPQ GIKLTPKHFA YLKISEGCNH RCTFCIIPSM RGNLVSRPVS DVVAEARRLK
EAGVKELLVV SQDTAAYGVD VKYKTEFADG RPTKTSMFGL AEALSELGIW VRLHYVYPYP
NVEDVIPLMA EGKLLPYLDM PLQHADPDIL KAMKRPGNVD KTLERIKKWR EQVPDLTIRS
TFIVGFPGET EAQFQNLLDF IEEAQLDRVG CFQYSPVEGA VANDLAEPVP DEVKQERFDR
FMQLQQQISA NKMQAKIGKT IQVLVDEVDE EGAIARSKAD APEIDGMVFI PEGHHLNPGD
FVEVEVFAAD EYDLWATPVG EFVPQETSYV ELG