| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1279 |
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| Symbol | |
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| ID | 3761668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1394879 |
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| End bp | 1396249 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637786011 |
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| Product | putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_391548 |
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| Protein GI | 78485623 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.253686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATTAC TTTGGTCTAT TCTTGGCTTC ATTATTGCAA TGGGATTGCT GGTAACCATT
CATGAATGGG GTCACTATAT TGTGGCTAGA CTGTTTAATA TCAAAGTGAC GCATTTTTCC
ATTGGTTTTG GTAAGCCGAT TTATGTTAAG CAGAAGGGCG AGACACAATT TCAAATTGGC
AGTATCCCAC TGGGTGGGTA TGTTAAGTTT GCAGACGAGC GTGAAGGCAA CGTGGCCCAA
GAAGATTTGG CAAGAGCCTT TAATAGACAA AATGTGTATC GTCGTTTTGC CGTGGTGTCA
GCTGGCCCGT TAGTGAATTT GGTTTTTGCC TGGATTGCTT TTTCGTTGAT TTATTTTTCA
GGCGTCACAG GGTTAAAGCC GGTTTTTGAA GAGGTGTCGC CGCATTCTGT TCTGTCAAAA
TCTTTACCAG ATAATCATCA GGCCTGGCAG GTGGAGAGTG TTAACGGCAA AGCCGTTCTG
GATTGGAAAA ACGTTTATCA AAACGTGTTA CAGGCCTTGG TTAATAATCG GCAGTCGATA
GAAGTTAAGC TGGTTTCCCT TGATACTCAA GTCAGTAAAA CAGTTTTTTT ACCCTTGTCA
GAACTGGACA TAAACACACC CAAACAAAAA TGGCTTTCGG TACTAGGCTT TAAGCCTAAA
TATCCTGAAA TGCCCGCTGT AATTGACCAA GTTTTGTCAG ACTCTCCTGC TGAAAGACTG
GGGCTTGAAA AAGGTGATTT GATTCTCCAA ATTGATCGGT TGCCTGTGGA AAATTGGAAT
CAGTTTGTGG CGTATGTTCA AAAGCACCCA AATGAAACGG TGCAATTGTC TTTCAAACGA
AATGATGTTG TTTTTCAAAA AGACATCCGG CTGGATGAAA AAACTTTTAA TGGTCTGCCG
GTTGGCAGTC TGGGCGCATC GGTGTTCTTG GATGAAACGC TTTTAAAAGA CTATAAAGTC
TCGGTATCTT ATGGCCCGTT AGAGTCGATT CAAAAGGGCT GGACACATAG TGTGGCGTTG
CTTGATATGA CCGTCAATAT GATTAAAAGA ATGATCATAG GTGAAGTCTC AATTAAAAAC
CTTTCTGGAC CTGTTAGTAT TGCAGAGTTT TCTGGGCAAG CGCTTCAAAA TGGATGGATC
GCCTTTTTAA GTTTATTAGG GTTGTTAAGC TTGAGTTTAG GGATTTTAAA TTTACTCCCC
ATACCGGTAT TGGATGGCGG GCATCTCTTC TTTTATGTCA TTGAGATGAT TAAAGGAACT
CCGGTTAGAG AATCGATTGA GCTGGTGGCT CAAAAGGTTG GAGTGGCCCT TATCTTGATG
CTTACTTTTT TTGCTTTATT TAATGATGTG GTACGAATTT CCAATGGTTA A
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| Protein sequence | MALLWSILGF IIAMGLLVTI HEWGHYIVAR LFNIKVTHFS IGFGKPIYVK QKGETQFQIG
SIPLGGYVKF ADEREGNVAQ EDLARAFNRQ NVYRRFAVVS AGPLVNLVFA WIAFSLIYFS
GVTGLKPVFE EVSPHSVLSK SLPDNHQAWQ VESVNGKAVL DWKNVYQNVL QALVNNRQSI
EVKLVSLDTQ VSKTVFLPLS ELDINTPKQK WLSVLGFKPK YPEMPAVIDQ VLSDSPAERL
GLEKGDLILQ IDRLPVENWN QFVAYVQKHP NETVQLSFKR NDVVFQKDIR LDEKTFNGLP
VGSLGASVFL DETLLKDYKV SVSYGPLESI QKGWTHSVAL LDMTVNMIKR MIIGEVSIKN
LSGPVSIAEF SGQALQNGWI AFLSLLGLLS LSLGILNLLP IPVLDGGHLF FYVIEMIKGT
PVRESIELVA QKVGVALILM LTFFALFNDV VRISNG
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