| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1278 |
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| Symbol | |
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| ID | 3761667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1392595 |
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| End bp | 1394886 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786010 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_391547 |
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| Protein GI | 78485622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAC AGTTTCTTCA ATTTTCTCTT CTTGCATTCA TACTGCTCTT TAATCTCTCT
GTTGTGAAGG CGTCAGACTT TCAAATTAAT GAGATTCAAA TAGAAGGGAA TAAACGAATC
AGTTTTGAAA CGGTTCGTAG TTATTTACCC ATTGAAGTAG GCGATGAGCT TTCTCGTGAG
AAAGTCCAAA AAAGTATTCA AGCTCTCTAT CAAACTGGAT TCTTTAGAGA CATTGCTTTT
TTTCAAGAAG CTGGCGGCAT TCTAAAAATT AGGGTGCTTG AGCGTCCTTC TATTGCCGAT
ATCAGCATTG AAGGTAACGA ACTGATTAAG ACTGAAGATA TGACGCAAGC CTTGAATACG
ATGGGAGTCA AAAAAGGGCG TATTTTCAAT GACACTCAGA TGGAACGTAT TATCCTGGAT
TTAAGAAGAC GTTACCAAAA CCAAGGGTAT TACGCGGCTG AGATCGATAT TCAAGTCAAA
GAATTGCCTC GCAACCGTGT TTCTTTGGAA ATTAAAGTCG AAGAAGGTAA ACCAGCCAGT
ATTGGTCGAA TTACTTTGGT GGGCAATAAA ACCTATGATG ATGAACGCTT AAAAGGAAAT
TTGCTGTTGT CCGAATCGGC AATCATTGGA GACTCTGACA AGTACGCGAA ACCCAAACTT
CAGTCCGATA TCGAAACTTT ACGTTCTTAT TATATGGACC GAGGTTTTGC TGAGTTCAAA
GTGGCGTCGT CTCAGGTGAG TTTGTCTTTG GATAAAACTC AAGTCTTCAT TACCATCAAT
ATGAAAGAGG GCGTGCAATA CACCGTTTCA AATATAAAAT TTACTGGGGA AACCATTGTT
AAGCCAGATG AACTTAAGAG TTTGTTGAAA ATTCACGAAG GGGATTTCTT TTCGAGAAGT
CAAATTGTCG CGACGGTCAA TGCCATTCGC GATCGTTTAA GTGAAGAAGG CTATGCGTTT
GCTGAAATTG AACCGATCAC CCAGTTGGAT AAGAATAATC GTTTGGTATC GCTGGATTTT
CGAATCGAGC CGAAAAGCCG TGTTTATGTT CGCCGTATCC GTATTGAGGG TAATACACGA
ACGCGTGATT ATGTGATTCG AAGAGAGTTG CGACAGTTTG AAAATGCGCC TTATTCATTA
AAAGCGGTGC GTCGCTCCAA TACACGACTC AATCGCTTAG GGTATTTTAA AACGGCTAAG
GTCGACACCG ATCGTATTTC AAAAGATCAA GTTGATCTGG TGGTGAAAGT CGAAGAACAG
TCAACCGGCG CATTTAATGC TGGGATAGGG TATTCTCAGT TGGACGGTAT CAGTTTCACT
GTTGGGGTAA CTGAACGAAA TGTTATAGGA TCTGGTTATC GAGCCAATGT GAACGGAACT
TATAGTGCCT CTACTAAATC CGCTGATGTC GGCGTGACGA ACCCTTACTT TACCGCAGAT
GGTGTTTCAT TGGGTGGGGG GCTTTATTAC CGCGAAATCG ATGCTCAAGA GTTAAATGTG
TCAAACTATA CAACGAATAA CTATGGGGTA AGACTTAATA TGGGGTACCC CACCAGTGAA
TGGAGTAGCT TGAGTTATGG GTTGAAGTTT GATGATCAAA CCTTGAAGTG TATTGATACG
TTTACAGCCT GTAAAACGTA TACCAATACT TATGGTCGTC ATTTTAATTC TGTGCGCTAC
ACCATGGGTT GGAGCTATGA CACTAAGAAC GCTTTCTACT TTCCAACTGA TGGGCAGCGA
ACCAGTGTGA GTGGTGAGCT GGTGATACCG ACAAGCTCTG AAGTTTCTTT TTATAAGTTG
TATTTGGAAG AAACCTTTTA TCAGCCGCTT TCACAGTATT TTACGTTGAG ACTCAAAGGA
GATATCGCTT ACGGTGACGG TTATGGTGAT CATGATGAGC TTCCTTTTTA TGAAAACTTT
TATGCGGGGG GGATTGGAAC CGTTAGAGGG TTTGAGCCTA ACTCTTTGGG ACCAAGATAC
GATGCCGTAA CCGACGGATC AACGGATCCT ATTGGGGGAA GCTTAAGAAT TGTGACAAAT
GCAGAAGTGA CCTTCCCGAT GCCTTTTGTC GAGGATTCAG GCAATCTTCG TTTGAGTCTT
TTTGTGGATG CAGGGAATGT CTTTAGTGAT GCAAGTGCCG TTAAGTTACC TGAATTCCGA
TCAGCAGCTG GGGTAGGGGT CGCTTGGATT ACACCTGTTG GACCTTTAGC ATTTAGTTTT
GCGAAAGCCC TTAATTATAA AGATACCGAT AGAACTCAAG TTTTCCAATT TAACTTAGGC
GTCCCGATGT AA
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| Protein sequence | MVKQFLQFSL LAFILLFNLS VVKASDFQIN EIQIEGNKRI SFETVRSYLP IEVGDELSRE
KVQKSIQALY QTGFFRDIAF FQEAGGILKI RVLERPSIAD ISIEGNELIK TEDMTQALNT
MGVKKGRIFN DTQMERIILD LRRRYQNQGY YAAEIDIQVK ELPRNRVSLE IKVEEGKPAS
IGRITLVGNK TYDDERLKGN LLLSESAIIG DSDKYAKPKL QSDIETLRSY YMDRGFAEFK
VASSQVSLSL DKTQVFITIN MKEGVQYTVS NIKFTGETIV KPDELKSLLK IHEGDFFSRS
QIVATVNAIR DRLSEEGYAF AEIEPITQLD KNNRLVSLDF RIEPKSRVYV RRIRIEGNTR
TRDYVIRREL RQFENAPYSL KAVRRSNTRL NRLGYFKTAK VDTDRISKDQ VDLVVKVEEQ
STGAFNAGIG YSQLDGISFT VGVTERNVIG SGYRANVNGT YSASTKSADV GVTNPYFTAD
GVSLGGGLYY REIDAQELNV SNYTTNNYGV RLNMGYPTSE WSSLSYGLKF DDQTLKCIDT
FTACKTYTNT YGRHFNSVRY TMGWSYDTKN AFYFPTDGQR TSVSGELVIP TSSEVSFYKL
YLEETFYQPL SQYFTLRLKG DIAYGDGYGD HDELPFYENF YAGGIGTVRG FEPNSLGPRY
DAVTDGSTDP IGGSLRIVTN AEVTFPMPFV EDSGNLRLSL FVDAGNVFSD ASAVKLPEFR
SAAGVGVAWI TPVGPLAFSF AKALNYKDTD RTQVFQFNLG VPM
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