Gene Tcr_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1275 
Symbol 
ID3761664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1390445 
End bp1390891 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content38% 
IMG OID637786007 
Productbeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 
Protein accessionYP_391544 
Protein GI78485619 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.843917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACA TGTTGAATGT AAAAGAAATA TTTGAATATC TGCCTCATAG ATATCCTTTT 
TTATTAGTAG ATCGTGTGAC TGAATTTAAA TCGGGTGAAT CCTTAAAAGC CTATAAAAAC 
GTGACTTATA ATGAGCCGCA GTTCACAGGT CATTTTCCTG ATAATCCGAT CATGCCAGGG 
GTTATGATCA TTGAAGCCAT GGCACAATGT ACAGGCATTC TTGCCTTTAA AACGCAAGAT 
GTAAAGCCTG ATGGTACTTC AATGTATTAC CTTGCAGCGG TTGATAATTG TCGTTTTAGA 
AAACCGGCCA TTCCTGGTGA CAAACTAGAA TTTGAGGTAA AGACGGTTAA CAATAAAAAA 
GGCATTTGGA AATTTGAGTG TACAACCAGC GTTGACGGAA AGTTAATCGC TTCTTGCGAT 
ATGCTATGTG CTGAGCGCAA AGTTTAA
 
Protein sequence
MTNMLNVKEI FEYLPHRYPF LLVDRVTEFK SGESLKAYKN VTYNEPQFTG HFPDNPIMPG 
VMIIEAMAQC TGILAFKTQD VKPDGTSMYY LAAVDNCRFR KPAIPGDKLE FEVKTVNNKK 
GIWKFECTTS VDGKLIASCD MLCAERKV